ENSGALG00000011342


Gallus gallus

Features
Gene ID: ENSGALG00000011342
  
Biological name :FGD6
  
Synonyms : FGD6 / FYVE, RhoGEF and PH domain containing 6
  
Possible biological names infered from orthology : FYVE, RhoGEF and PH domain-containing protein 6 / Q69ZL1 / Q6ZV73
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 45374215
Gene end: 45438791
  
Corresponding Affymetrix probe sets: Gga.19973.1.A1_at (Chicken Array)   Gga.19973.1.S1_s_at (Chicken Array)   GgaAffx.23532.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018485
NCBI entrez gene - 417908     See in Manteia.
RefSeq - XM_015283990
swissprot - F1NVP2
Ensembl - ENSGALG00000011342
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fgd6ENSDARG00000045528Danio rerio
 FGD6ENSG00000180263Homo sapiens
 Fgd6ENSMUSG00000020021Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FGD5 / FYVE, RhoGEF and PH domain containing 5 / Q6ZNL6*ENSGALG0000000854626
FGD3 / FYVE, RhoGEF and PH domain containing 3 / Q5JSP0*ENSGALG0000000523714
FGD4 / FYVE, RhoGEF and PH domain containing 4 / Q91ZT5* / Q96M96* / FYVE, RhoGEF and PH domain-containing protein 4 *ENSGALG0000001293212
PLEKHF1 / pleckstrin homology and FYVE domain containing 1 / Q3TB82* / Q96S99* / Pleckstrin homology domain-containing family F member 1 *ENSGALG000000044746
PLEKHF2 / pleckstrin homology domain-containing family F member 2 / Q91WB4* / Q9H8W4* / pleckstrin homology and FYVE domain containing 2*ENSGALG000000402486


Protein motifs (from Interpro)
Interpro ID Name
 IPR000219  Dbl homology (DH) domain
 IPR000306  FYVE zinc finger
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017455  Zinc finger, FYVE-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035023 regulation of Rho protein signal transduction IEA
 biological_processGO:0043087 regulation of GTPase activity IEA
 molecular_functionGO:0005085 guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0005089 Rho guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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