ENSDARG00000045528


Danio rerio

Features
Gene ID: ENSDARG00000045528
  
Biological name :fgd6
  
Synonyms : fgd6 / FYVE, RhoGEF and PH domain containing 6
  
Possible biological names infered from orthology : FYVE, RhoGEF and PH domain-containing protein 6 / Q69ZL1 / Q6ZV73
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 25859445
Gene end: 25911609
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000143487
Ensembl peptide - ENSDARP00000147555
Ensembl peptide - ENSDARP00000066948
NCBI entrez gene - 556459     See in Manteia.
RefSeq - NM_001099980
RefSeq Peptide - NP_001093450
swissprot - A0A286Y8J4
swissprot - Q5RH33
ZFIN ID - ZDB-GENE-041210-200
Ensembl - ENSDARG00000045528
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FGD6ENSGALG00000011342Gallus gallus
 FGD6ENSG00000180263Homo sapiens
 Fgd6ENSMUSG00000020021Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fgd5a / FYVE, RhoGEF and PH domain containing 5a / FGD5* / Q6ZNL6* / FYVE, RhoGEF and PH domain containing 5*ENSDARG0000008880123
fgd1 / FYVE, RhoGEF and PH domain containing 1 / P52734* / P98174* / FYVE, RhoGEF and PH domain-containing protein 1 *ENSDARG0000010040215
fgd4a / FYVE, RhoGEF and PH domain containing 4a / FGD4* / Q91ZT5* / Q96M96* / FYVE, RhoGEF and PH domain containing 4* / FYVE, RhoGEF and PH domain-containing protein 4 *ENSDARG0000010147114
fgd4b / FYVE, RhoGEF and PH domain containing 4b / FGD4* / Q96M96* / FYVE, RhoGEF and PH domain containing 4*ENSDARG0000006024814
fgd5b / FYVE, RhoGEF and PH domain containing 5b / FGD5* / Q6ZNL6* / FYVE, RhoGEF and PH domain containing 5*ENSDARG0000008962213
CABZ01079663.1 / FGD3* / Q5JSP0* / FYVE, RhoGEF and PH domain containing 3*ENSDARG000000996509
plekhf1 / pleckstrin homology domain containing, family F (with FYVE domain) member 1 / Q3TB82* / Q96S99* / pleckstrin homology and FYVE domain containing 1* / Pleckstrin homology domain-co...ENSDARG000001024356
Q7ZUV1 / plekhf2 / pleckstrin homology domain containing, family F (with FYVE domain) member 2 / Q91WB4* / Q9H8W4* / pleckstrin homology and FYVE domain containing 2* / Pleckstrin homology ...ENSDARG000000211416


Protein motifs (from Interpro)
Interpro ID Name
 IPR000219  Dbl homology (DH) domain
 IPR000306  FYVE zinc finger
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017455  Zinc finger, FYVE-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035023 regulation of Rho protein signal transduction IEA
 biological_processGO:0043087 regulation of GTPase activity IEA
 biological_processGO:0065009 regulation of molecular function IEA
 molecular_functionGO:0005085 guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0005089 Rho guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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