ENSDARG00000089622


Danio rerio

Features
Gene ID: ENSDARG00000089622
  
Biological name :fgd5b
  
Synonyms : fgd5b / FYVE, RhoGEF and PH domain containing 5b
  
Possible biological names infered from orthology : FGD5 / FYVE, RhoGEF and PH domain containing 5 / Q6ZNL6
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 40482330
Gene end: 40499799
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128873
swissprot - E7F843
ZFIN ID - ZDB-GENE-130925-3
Ensembl - ENSDARG00000089622
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FGD5ENSGALG00000008546Gallus gallus
 FGD5ENSG00000154783Homo sapiens
 Fgd5ENSMUSG00000034037Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fgd5a / FYVE, RhoGEF and PH domain containing 5a / FGD5* / Q6ZNL6* / FYVE, RhoGEF and PH domain containing 5*ENSDARG0000008880164
fgd6 / FYVE, RhoGEF and PH domain containing 6 / Q69ZL1* / Q6ZV73* / FYVE, RhoGEF and PH domain-containing protein 6 *ENSDARG0000004552843
fgd1 / FYVE, RhoGEF and PH domain containing 1 / P52734* / P98174* / FYVE, RhoGEF and PH domain-containing protein 1 *ENSDARG0000010040227
fgd4a / FYVE, RhoGEF and PH domain containing 4a / FGD4* / Q91ZT5* / Q96M96* / FYVE, RhoGEF and PH domain containing 4* / FYVE, RhoGEF and PH domain-containing protein 4 *ENSDARG0000010147126
fgd4b / FYVE, RhoGEF and PH domain containing 4b / FGD4* / Q96M96* / FYVE, RhoGEF and PH domain containing 4*ENSDARG0000006024826
Q7ZUV1 / plekhf2 / pleckstrin homology domain containing, family F (with FYVE domain) member 2 / Q91WB4* / Q9H8W4* / pleckstrin homology and FYVE domain containing 2* / Pleckstrin homology ...ENSDARG0000002114116
plekhf1 / pleckstrin homology domain containing, family F (with FYVE domain) member 1 / Q3TB82* / Q96S99* / pleckstrin homology and FYVE domain containing 1* / Pleckstrin homology domain-co...ENSDARG0000010243515
CABZ01079663.1 / FGD3* / Q5JSP0* / FYVE, RhoGEF and PH domain containing 3*ENSDARG0000009965014


Protein motifs (from Interpro)
Interpro ID Name
 IPR000306  FYVE zinc finger
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017455  Zinc finger, FYVE-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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