ENSDARG00000102435


Danio rerio

Features
Gene ID: ENSDARG00000102435
  
Biological name :plekhf1
  
Synonyms : pleckstrin homology domain containing, family F (with FYVE domain) member 1 / plekhf1
  
Possible biological names infered from orthology : pleckstrin homology and FYVE domain containing 1 / Pleckstrin homology domain-containing family F member 1 / Q3TB82 / Q96S99
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 45975537
Gene end: 45976956
  
Corresponding Affymetrix probe sets: Dr.13076.1.S1_at (Zebrafish Array)   NM_200340_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000140389
NCBI entrez gene - 393311     See in Manteia.
RefSeq - NM_200340
RefSeq Peptide - NP_956634
swissprot - Q7T3F6
ZFIN ID - ZDB-GENE-040426-1289
Ensembl - ENSDARG00000102435
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PLEKHF1ENSGALG00000004474Gallus gallus
 Q96S99ENSG00000166289Homo sapiens
 Q3TB82ENSMUSG00000074170Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q7ZUV1 / plekhf2 / pleckstrin homology domain containing, family F (with FYVE domain) member 2 / Q91WB4* / Q9H8W4* / pleckstrin homology and FYVE domain containing 2* / Pleckstrin homology ...ENSDARG0000002114134
fgd6 / FYVE, RhoGEF and PH domain containing 6 / Q69ZL1* / Q6ZV73* / FYVE, RhoGEF and PH domain-containing protein 6 *ENSDARG0000004552825
fgd1 / FYVE, RhoGEF and PH domain containing 1 / P52734* / P98174* / FYVE, RhoGEF and PH domain-containing protein 1 *ENSDARG0000010040224
fgd5a / FYVE, RhoGEF and PH domain containing 5a / FGD5* / Q6ZNL6* / FYVE, RhoGEF and PH domain containing 5*ENSDARG0000008880122
fgd5b / FYVE, RhoGEF and PH domain containing 5b / FGD5* / Q6ZNL6* / FYVE, RhoGEF and PH domain containing 5*ENSDARG0000008962220
fgd4a / FYVE, RhoGEF and PH domain containing 4a / FGD4* / Q91ZT5* / Q96M96* / FYVE, RhoGEF and PH domain containing 4* / FYVE, RhoGEF and PH domain-containing protein 4 *ENSDARG0000010147120
fgd4b / FYVE, RhoGEF and PH domain containing 4b / FGD4* / Q96M96* / FYVE, RhoGEF and PH domain containing 4*ENSDARG0000006024820
CABZ01079663.1 / FGD3* / Q5JSP0* / FYVE, RhoGEF and PH domain containing 3*ENSDARG0000009965013


Protein motifs (from Interpro)
Interpro ID Name
 IPR000306  FYVE zinc finger
 IPR001849  Pleckstrin homology domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR011993  PH-like domain superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017455  Zinc finger, FYVE-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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