ENSGALG00000004474


Gallus gallus

Features
Gene ID: ENSGALG00000004474
  
Biological name :PLEKHF1
  
Synonyms : pleckstrin homology and FYVE domain containing 1 / PLEKHF1
  
Possible biological names infered from orthology : Pleckstrin homology domain-containing family F member 1 / Q3TB82 / Q96S99
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 8496573
Gene end: 8497394
  
Corresponding Affymetrix probe sets: GgaAffx.2767.1.A1_at (Chicken Array)   GgaAffx.2767.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007112
NCBI entrez gene - 427546     See in Manteia.
RefSeq - XM_004944208
RefSeq - XM_004944209
RefSeq - XM_004944210
RefSeq - XM_015292426
RefSeq - XM_015292427
RefSeq - XM_004944207
swissprot - E1BSW6
Ensembl - ENSGALG00000004474
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 plekhf1ENSDARG00000102435Danio rerio
 Q96S99ENSG00000166289Homo sapiens
 Q3TB82ENSMUSG00000074170Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PLEKHF2 / pleckstrin homology domain-containing family F member 2 / Q91WB4* / Q9H8W4* / pleckstrin homology and FYVE domain containing 2*ENSGALG0000004024851
FGD6 / FYVE, RhoGEF and PH domain containing 6 / Q69ZL1* / Q6ZV73* / FYVE, RhoGEF and PH domain-containing protein 6 *ENSGALG0000001134229
FGD5 / FYVE, RhoGEF and PH domain containing 5 / Q6ZNL6*ENSGALG0000000854624
FGD3 / FYVE, RhoGEF and PH domain containing 3 / Q5JSP0*ENSGALG0000000523722
FGD4 / FYVE, RhoGEF and PH domain containing 4 / Q91ZT5* / Q96M96* / FYVE, RhoGEF and PH domain-containing protein 4 *ENSGALG0000001293222


Protein motifs (from Interpro)
Interpro ID Name
 IPR000306  FYVE zinc finger
 IPR001849  Pleckstrin homology domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR011993  PH-like domain superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017455  Zinc finger, FYVE-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007032 endosome organization IEA
 biological_processGO:0010508 positive regulation of autophagy IEA
 biological_processGO:0016050 vesicle organization IEA
 biological_processGO:0072659 protein localization to plasma membrane IEA
 biological_processGO:2001244 positive regulation of intrinsic apoptotic signaling pathway IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005768 endosome IEA
 molecular_functionGO:0010314 phosphatidylinositol-5-phosphate binding IEA
 molecular_functionGO:0032266 phosphatidylinositol-3-phosphate binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070273 phosphatidylinositol-4-phosphate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr