ENSGALG00000011388


Gallus gallus

Features
Gene ID: ENSGALG00000011388
  
Biological name :RABGGTB
  
Synonyms : Rab geranylgeranyltransferase beta subunit / RABGGTB
  
Possible biological names infered from orthology : P53611 / P53612 / Rab geranylgeranyl transferase, b subunit
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 29887798
Gene end: 29899133
  
Corresponding Affymetrix probe sets: GgaAffx.23543.1.S1_at (Chicken Array)   GgaAffx.7234.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018552
Ensembl peptide - ENSGALP00000063914
Ensembl peptide - ENSGALP00000063306
Ensembl peptide - ENSGALP00000063060
Ensembl peptide - ENSGALP00000062289
Ensembl peptide - ENSGALP00000061041
Ensembl peptide - ENSGALP00000060848
Ensembl peptide - ENSGALP00000045462
Ensembl peptide - ENSGALP00000045162
Ensembl peptide - ENSGALP00000043871
NCBI entrez gene - 424723     See in Manteia.
RefSeq - XM_422548
swissprot - A0A1L1RWT8
swissprot - A0A1L1RW51
swissprot - A0A1L1RTZ4
swissprot - A0A1L1RQG8
swissprot - A0A1L1RYI1
swissprot - A0A1D5NYK4
swissprot - A0A1D5NXR3
swissprot - A0A1D5NU62
swissprot - F1P4E5
swissprot - A0A1L1RPX9
Ensembl - ENSGALG00000011388
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rabggtbENSDARG00000068587Danio rerio
 P53611ENSG00000137955Homo sapiens
 P53612ENSMUSG00000038975Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PGGT1B / protein geranylgeranyltransferase type I subunit beta / P53609* / Q8BUY9* / Geranylgeranyl transferase type-1 subunit beta *ENSGALG0000000819730


Protein motifs (from Interpro)
Interpro ID Name
 IPR001330  PFTB repeat
 IPR008930  Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
 IPR026873  Geranylgeranyl transferase type-2 subunit beta


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0018344 protein geranylgeranylation IEA
 cellular_componentGO:0005968 Rab-protein geranylgeranyltransferase complex IBA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004663 Rab geranylgeranyltransferase activity IEA


Pathways (from Reactome)
Pathway description
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr