ENSGALG00000011402


Gallus gallus

Features
Gene ID: ENSGALG00000011402
  
Biological name :CNOT9
  
Synonyms : CCR4-NOT transcription complex subunit 9 / CNOT9
  
Possible biological names infered from orthology : Q92600 / Q9JKY0
  
Species: Gallus gallus
  
Chr. number: 7
Strand: -1
Band:
Gene start: 22615902
Gene end: 22627525
  
Corresponding Affymetrix probe sets: Gga.3768.1.S1_s_at (Chicken Array)   Gga.3768.2.S1_at (Chicken Array)   Gga.5610.1.A1_at (Chicken Array)   GgaAffx.12327.1.S1_at (Chicken Array)   GgaAffx.20199.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018575
Ensembl peptide - ENSGALP00000062783
Ensembl peptide - ENSGALP00000061175
Ensembl peptide - ENSGALP00000056889
Ensembl peptide - ENSGALP00000054573
NCBI entrez gene - 424215     See in Manteia.
RefSeq - NM_001006521
RefSeq - XM_015289800
RefSeq Peptide - NP_001006521
swissprot - A0A1D5PNX7
swissprot - A0A1L1RVC9
swissprot - F2Z4M8
swissprot - A0A1L1RQV6
swissprot - A0A1D5PVC4
Ensembl - ENSGALG00000011402
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cnot9ENSDARG00000033855Danio rerio
 CNOT9ENSG00000144580Homo sapiens
 Cnot9ENSMUSG00000026174Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007216  CCR4-NOT transcription complex subunit 9
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IBA
 biological_processGO:0006402 mRNA catabolic process IEA
 biological_processGO:0017148 negative regulation of translation IBA
 biological_processGO:0019221 cytokine-mediated signaling pathway IEA
 biological_processGO:0033138 positive regulation of peptidyl-serine phosphorylation IEA
 biological_processGO:0033147 negative regulation of intracellular estrogen receptor signaling pathway IEA
 biological_processGO:0045742 positive regulation of epidermal growth factor receptor signaling pathway IEA
 biological_processGO:2000327 positive regulation of nuclear receptor transcription coactivator activity IEA
 cellular_componentGO:0000932 P-body IBA
 cellular_componentGO:0030014 CCR4-NOT complex IEA
 cellular_componentGO:0030015 CCR4-NOT core complex IBA
 cellular_componentGO:0032991 protein-containing complex IEA
 molecular_functionGO:0005154 epidermal growth factor receptor binding IEA
 molecular_functionGO:0019900 kinase binding IEA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
Deadenylation of mRNA
TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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