Manteia

ENSGALG00000011418

Gallus gallus

Features

Gene ID:	ENSGALG00000011418

Biological name :	CCR6

Synonyms :	C-C chemokine receptor type 6 / CCR6

Possible biological names infered from orthology :	C-C motif chemokine receptor 6 / Mus musculus chemokine (C-C motif) receptor 6 (Ccr6), transcript variant 7, mRNA. / O54689 / P51684

Species:	Gallus gallus

Chr. number:	3
Strand:	-1
Band:
Gene start:	42599910
Gene end:	42601090

Corresponding Affymetrix probe sets:	GgaAffx.7251.1.S1_at (Chicken Array)

Cross references:	Ensembl peptide - ENSGALP00000031194 NCBI entrez gene - 769278 See in Manteia. RefSeq - NM_001114081 RefSeq - XM_015284122 RefSeq - XM_015284123 RefSeq Peptide - NP_001107553 swissprot - F1NPD4 Ensembl - ENSGALG00000011418

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
ccr6a	ENSDARG00000087474	Danio rerio
ccr6b	ENSDARG00000038968	Danio rerio
CCR6	ENSG00000112486	Homo sapiens
Ccr6	ENSMUSG00000040899	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
CCR7 / C-C motif chemokine receptor 7 / P32248* / P47774* / C-C chemokine receptor type 7 *	ENSGALG00000035733	38
CCR9 / C-C chemokine receptor type 9 / P51686* / Q9WUT7* / C-C motif chemokine receptor 9*	ENSGALG00000011808	32
CX3CR1 / C-X3-C motif chemokine receptor 1 / P49238* / Q9Z0D9* / CX3C chemokine receptor 1 *	ENSGALG00000038000	32
CCR2 / C-C chemokine receptor type 2 / CCR1* / CCR5* / CCR3* / P51681* / P51683* / P51675* / P51676* / P51677* / P51678* / P51682* / Ccr1l1* / P32246* / P41597* / C-C motif chemokine recep...	ENSGALG00000011733	31
CCR4 / C-C motif chemokine receptor 4 / P51679* / P51680* / C-C chemokine receptor type 4 *	ENSGALG00000039146	31
CCR5 / CCR1* / CCR3* / CCR2* / P51681* / P41597* / P51675* / P51676* / P51677* / P51678* / P51682* / P51683* / Ccr1l1* / P32246* / C-C motif chemokine receptor 3* / C-C chemokine receptor t...	ENSGALG00000037077	31
CXCR5 / C-X-C motif chemokine receptor 5 / P32302* / Q04683* / C-X-C chemokine receptor type 5 *	ENSGALG00000007675	31
ACKR4 / atypical chemokine receptor 4 / Q924I3* / Q9NPB9*	ENSGALG00000041491	31
CXCR1 / CXCR2* / Q810W6* / P25024* / P25025* / P35343* / C-X-C chemokine receptor type 1 * / C-X-C motif chemokine receptor 2* / C-X-C motif chemokine receptor 1* / C-X-C chemokine receptor type 2 *	ENSGALG00000036627	30
ACKR2 / atypical chemokine receptor 2 / O00590* / O08707*	ENSGALG00000005305	29
CCR10 / C-C motif chemokine receptor 10 / P46092* / Q9JL21* / C-C chemokine receptor type 10 *	ENSGALG00000028519	28
CXCR4 / C-X-C motif chemokine receptor 4 / P61073* / Mus musculus chemokine (C-X-C motif) receptor 4 (Cxcr4), transcript variant 2, mRNA.*	ENSGALG00000012357	28
CCR8L / C-C chemokine receptor 8 like / CCR8* / P51685* / P56484* / C-C motif chemokine receptor 8* / C-C chemokine receptor type 8 *	ENSGALG00000011734	28
CCR8 / C-C motif chemokine receptor 8 / P51685* / P56484* / C-C chemokine receptor type 8 *	ENSGALG00000038069	27
XCR1 / X-C motif chemokine receptor 1 / P46094* / chemokine (C motif) receptor 1*	ENSGALG00000011735	26

Protein motifs (from Interpro)

Interpro ID	Name
IPR000276	G protein-coupled receptor, rhodopsin-like
IPR000355	Chemokine receptor family
IPR001277	CXC chemokine receptor 4/atypical chemokine receptor 2
IPR017452	GPCR, rhodopsin-like, 7TM

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0002523	leukocyte migration involved in inflammatory response	IEA
biological_process	GO:0006935	chemotaxis	IEA
biological_process	GO:0006955	immune response	IEA
biological_process	GO:0007165	signal transduction	IEA
biological_process	GO:0007186	G-protein coupled receptor signaling pathway	IEA
biological_process	GO:0019722	calcium-mediated signaling	IEA
biological_process	GO:0048290	isotype switching to IgA isotypes	IEA
biological_process	GO:0060326	cell chemotaxis	IEA
biological_process	GO:0060474	positive regulation of flagellated sperm motility involved in capacitation	IEA
biological_process	GO:0070098	chemokine-mediated signaling pathway	IEA
biological_process	GO:0072676	lymphocyte migration	IEA
biological_process	GO:0072678	T cell migration	IEA
biological_process	GO:0072679	thymocyte migration	IEA
biological_process	GO:1904155	DN2 thymocyte differentiation	IEA
biological_process	GO:1904156	DN3 thymocyte differentiation	IEA
biological_process	GO:2000404	regulation of T cell migration	IEA
cellular_component	GO:0005622	intracellular	IEA
cellular_component	GO:0009897	external side of plasma membrane	IEA
cellular_component	GO:0009986	cell surface	IEA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0016021	integral component of membrane	IEA
cellular_component	GO:0036126	sperm flagellum	IEA
cellular_component	GO:0097225	sperm midpiece	IEA
cellular_component	GO:0097228	sperm principal piece	IEA
cellular_component	GO:0097524	sperm plasma membrane	IEA
molecular_function	GO:0004871	obsolete signal transducer activity	IEA
molecular_function	GO:0004930	G-protein coupled receptor activity	IEA
molecular_function	GO:0004950	chemokine receptor activity	IEA
molecular_function	GO:0016493	C-C chemokine receptor activity	IEA
molecular_function	GO:0019957	C-C chemokine binding	IEA

Pathways (from Reactome)

Pathway description

Chemokine receptors bind chemokines

G alpha (i) signalling events

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID	Name	Interaction type
ENSGALG00000003003	CCL20 / C-C motif chemokine ligand 20 / O89093* / P78556* / C-C motif chemokine 20 *	/ complex / reaction

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr