ENSGALG00000011705


Gallus gallus

Features
Gene ID: ENSGALG00000011705
  
Biological name :BRF1
  
Synonyms : BRF1 / BRF1, RNA polymerase III transcription initiation factor subunit
  
Possible biological names infered from orthology : BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit / Q92994
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 52749257
Gene end: 52908313
  
Corresponding Affymetrix probe sets: Gga.18835.1.S1_at (Chicken Array)   GgaAffx.7455.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000019108
NCBI entrez gene - 423503     See in Manteia.
RefSeq - XM_015287873
RefSeq - XM_421405
swissprot - F1NQ85
Ensembl - ENSGALG00000011705
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 brf1aENSDARG00000017835Danio rerio
 brf1bENSDARG00000005002Danio rerio
 BRF1ENSG00000185024Homo sapiens
 Brf1ENSMUSG00000011158Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000812  Transcription factor TFIIB
 IPR011665  Brf1, TBP-binding domain
 IPR013137  Zinc finger, TFIIB-type
 IPR013150  Transcription factor TFIIB, cyclin-like domain
 IPR013763  Cyclin-like
 IPR029529  Transcription factor IIIB subunit Brf1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006359 regulation of transcription by RNA polymerase III IEA
 biological_processGO:0006383 transcription by RNA polymerase III IEA
 biological_processGO:0070897 DNA-templated transcriptional preinitiation complex assembly IEA
 cellular_componentGO:0000126 transcription factor TFIIIB complex IEA
 molecular_functionGO:0001026 obsolete TFIIIB-type transcription factor activity IEA
 molecular_functionGO:0017025 TBP-class protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000011171 TBP / TATA-box-binding protein / P20226* / P29037*  / complex






 

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