ENSGALG00000011823


Gallus gallus

Features
Gene ID: ENSGALG00000011823
  
Biological name :FAT4
  
Synonyms : FAT4 / FAT atypical cadherin 4
  
Possible biological names infered from orthology : Protocadherin Fat 4 / Q2PZL6 / Q6V0I7
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 52866490
Gene end: 52987950
  
Corresponding Affymetrix probe sets: Gga.9506.1.A1_at (Chicken Array)   Gga.9506.1.S1_s_at (Chicken Array)   GgaAffx.23680.1.S1_at (Chicken Array)   GgaAffx.23681.1.S1_at (Chicken Array)   GgaAffx.7499.1.S1_at (Chicken Array)   GgaAffx.7501.1.S1_at (Chicken Array)   GgaAffx.7504.1.S1_at (Chicken Array)   GgaAffx.7507.1.S1_at (Chicken Array)   GgaAffx.7511.1.S1_at (Chicken Array)   GgaAffx.7511.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000019273
NCBI entrez gene - 395166     See in Manteia.
RefSeq - XM_015276389
swissprot - F1NLP0
Ensembl - ENSGALG00000011823
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FAT4ENSDARG00000105285Danio rerio
 FAT4ENSG00000196159Homo sapiens
 Fat4ENSMUSG00000046743Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FAT1 / FAT atypical cadherin 1 / Q14517*ENSGALG0000001357924
FAT3 / FAT atypical cadherin 3 / Q8TDW7*ENSGALG0000001722924
FAT2 / FAT atypical cadherin 2 / Q5F226* / Q9NYQ8* / Protocadherin Fat 2 *ENSGALG0000000432023
cHz-cadherin precursor ENSGALG0000003308914
DCHS1 / dachsous cadherin-related 1 / E9PVD3* / Q96JQ0* / Protocadherin-16 *ENSGALG0000001733413
CELSR1 / cadherin EGF LAG seven-pass G-type receptor 1 / O35161* / Q9NYQ6*ENSGALG0000004335512
CDH23* / Q99PF4* / Q9H251* / Cadherin-23 * / cadherin related 23*ENSGALG0000003682410
CDH23* / Q99PF4* / Q9H251* / Cadherin-23 * / cadherin related 23*ENSGALG000000046539
CELSR3 / cadherin EGF LAG seven-pass G-type receptor 3 / Q91ZI0* / Q9NYQ7*ENSGALG000000367639
ENSGALG000000327508
ENSGALG000000046304
CELSR2* / Q9HCU4* / cadherin EGF LAG seven-pass G-type receptor 2* / cadherin EGF LAG seven-pass G-type receptor 2 isoform 2 *ENSGALG000000429612


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001791  Laminin G domain
 IPR001881  EGF-like calcium-binding domain
 IPR002126  Cadherin
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR015919  Cadherin-like
 IPR018097  EGF-like calcium-binding, conserved site
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001658 branching involved in ureteric bud morphogenesis IEA
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0003007 heart morphogenesis IEA
 biological_processGO:0007009 plasma membrane organization IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
 biological_processGO:0007219 Notch signaling pathway IEA
 biological_processGO:0008543 fibroblast growth factor receptor signaling pathway IEA
 biological_processGO:0021987 cerebral cortex development IEA
 biological_processGO:0022008 neurogenesis IEA
 biological_processGO:0035329 hippo signaling IEA
 biological_processGO:0043931 ossification involved in bone maturation IEA
 biological_processGO:0048565 digestive tract development IEA
 biological_processGO:0060122 inner ear receptor cell stereocilium organization IEA
 biological_processGO:0072006 nephron development IEA
 biological_processGO:0072137 condensed mesenchymal cell proliferation IEA
 biological_processGO:0072307 regulation of metanephric nephron tubule epithelial cell differentiation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045177 apical part of cell IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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