ENSGALG00000036824


Gallus gallus

Features
Gene ID: ENSGALG00000036824
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : Cadherin-23 / cadherin related 23 / CDH23 / Q99PF4 / Q9H251
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 11813371
Gene end: 11905029
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000044986
Ensembl peptide - ENSGALP00000057073
Ensembl peptide - ENSGALP00000045271
NCBI entrez gene - 423718     See in Manteia.
RefSeq - XM_015288254
RefSeq - XM_015288256
RefSeq - XM_015288257
swissprot - A0A1D5PVU5
swissprot - A0A1D5NY16
swissprot - A0A1D5NX93
Ensembl - ENSGALG00000036824
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdh23ENSDARG00000007561Danio rerio
 cdh23ENSDARG00000094454Danio rerio
 CDH23ENSG00000107736Homo sapiens
 Cdh23ENSMUSG00000012819Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FAT3 / FAT atypical cadherin 3 / Q8TDW7*ENSGALG0000001722929
FAT4 / FAT atypical cadherin 4 / Q2PZL6* / Q6V0I7* / Protocadherin Fat 4 *ENSGALG0000001182329
FAT1 / FAT atypical cadherin 1 / Q14517*ENSGALG0000001357928
FAT2 / FAT atypical cadherin 2 / Q5F226* / Q9NYQ8* / Protocadherin Fat 2 *ENSGALG0000000432028
CELSR1 / cadherin EGF LAG seven-pass G-type receptor 1 / O35161* / Q9NYQ6*ENSGALG0000004335520
ENSGALG0000003275020
CELSR3 / cadherin EGF LAG seven-pass G-type receptor 3 / Q91ZI0* / Q9NYQ7*ENSGALG0000003676319
cHz-cadherin precursor ENSGALG0000003308917
DCHS1 / dachsous cadherin-related 1 / E9PVD3* / Q96JQ0* / Protocadherin-16 *ENSGALG000000173344
CDH23* / Q99PF4* / Q9H251* / Cadherin-23 * / cadherin related 23*ENSGALG000000046531
ENSGALG000000046300
CELSR2* / Q9HCU4* / cadherin EGF LAG seven-pass G-type receptor 2* / cadherin EGF LAG seven-pass G-type receptor 2 isoform 2 *ENSGALG000000429610


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR033030  Cadherin-23


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007605 sensory perception of sound IEA
 biological_processGO:0007626 locomotory behavior IEA
 biological_processGO:0060122 inner ear receptor cell stereocilium organization IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032420 stereocilium IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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