ENSGALG00000017229


Gallus gallus

Features
Gene ID: ENSGALG00000017229
  
Biological name :FAT3
  
Synonyms : FAT3 / FAT atypical cadherin 3
  
Possible biological names infered from orthology : Q8TDW7
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 186427685
Gene end: 186783045
  
Corresponding Affymetrix probe sets: Gga.1950.1.S1_at (Chicken Array)   Gga.9487.1.S1_at (Chicken Array)   Gga.9507.1.A1_at (Chicken Array)   Gga.9507.1.S1_at (Chicken Array)   GgaAffx.11055.1.S1_s_at (Chicken Array)   GgaAffx.25202.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047017
Ensembl peptide - ENSGALP00000052952
Ensembl peptide - ENSGALP00000047632
Ensembl peptide - ENSGALP00000027793
Ensembl peptide - ENSGALP00000027797
NCBI entrez gene - 395167     See in Manteia.
RefSeq - XM_015279865
RefSeq - XM_015279827
RefSeq - XM_015279835
RefSeq - XM_015279842
RefSeq - XM_015279849
RefSeq - XM_015279853
RefSeq - XM_015279861
RefSeq - NM_001111323
RefSeq Peptide - NP_001104793
swissprot - A0A1D5PJF9
swissprot - A0A1D5P4M0
swissprot - F1NXZ3
swissprot - F1NXZ5
swissprot - A0A1D5P2W6
Ensembl - ENSGALG00000017229
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FAT3 (1 of many)ENSDARG00000087709Danio rerio
 fat3aENSDARG00000033840Danio rerio
 FAT3ENSG00000165323Homo sapiens
 Fat3ENSMUSG00000074505Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FAT1 / FAT atypical cadherin 1 / Q14517*ENSGALG0000001357953
FAT2 / FAT atypical cadherin 2 / Q5F226* / Q9NYQ8* / Protocadherin Fat 2 *ENSGALG0000000432043
FAT4 / FAT atypical cadherin 4 / Q2PZL6* / Q6V0I7* / Protocadherin Fat 4 *ENSGALG0000001182321
cHz-cadherin precursor ENSGALG0000003308914
DCHS1 / dachsous cadherin-related 1 / E9PVD3* / Q96JQ0* / Protocadherin-16 *ENSGALG0000001733412
CELSR1 / cadherin EGF LAG seven-pass G-type receptor 1 / O35161* / Q9NYQ6*ENSGALG0000004335512
CDH23* / Q99PF4* / Q9H251* / Cadherin-23 * / cadherin related 23*ENSGALG000000046539
CDH23* / Q99PF4* / Q9H251* / Cadherin-23 * / cadherin related 23*ENSGALG000000368249
CELSR3 / cadherin EGF LAG seven-pass G-type receptor 3 / Q91ZI0* / Q9NYQ7*ENSGALG000000367638
ENSGALG000000327508
ENSGALG000000046303
CELSR2* / Q9HCU4* / cadherin EGF LAG seven-pass G-type receptor 2* / cadherin EGF LAG seven-pass G-type receptor 2 isoform 2 *ENSGALG000000429612


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001791  Laminin G domain
 IPR001881  EGF-like calcium-binding domain
 IPR002126  Cadherin
 IPR013032  EGF-like, conserved site
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR015919  Cadherin-like
 IPR018097  EGF-like calcium-binding, conserved site
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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