ENSGALG00000012638


Gallus gallus

Features
Gene ID: ENSGALG00000012638
  
Biological name :CRY1
  
Synonyms : CRY1 / cryptochrome-1
  
Possible biological names infered from orthology : cryptochrome circadian regulator 1 / P97784 / Q16526
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 53642388
Gene end: 53676704
  
Corresponding Affymetrix probe sets: Gga.10394.1.S1_at (Chicken Array)   Gga.4107.1.S1_at (Chicken Array)   Gga.4107.1.S2_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020598
NCBI entrez gene - 374093     See in Manteia.
RefSeq - NM_204245
RefSeq Peptide - NP_989576
swissprot - F1NYE9
Ensembl - ENSGALG00000012638
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cry1aaENSDARG00000045768Danio rerio
 cry1abENSDARG00000011583Danio rerio
 CRY1ENSG00000008405Homo sapiens
 Cry1ENSMUSG00000020038Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CRY2 / cryptochrome-2 / Q49AN0* / Q9R194* / cryptochrome circadian regulator 2*ENSGALG0000000843667
CRY4ENSGALG0000000010444


Protein motifs (from Interpro)
Interpro ID Name
 IPR005101  Cryptochrome/DNA photolyase, FAD-binding domain
 IPR006050  DNA photolyase, N-terminal
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006094 gluconeogenesis IEA
 biological_processGO:0006975 DNA damage induced protein phosphorylation IEA
 biological_processGO:0007623 circadian rhythm IEA
 biological_processGO:0019915 lipid storage IEA
 biological_processGO:0031397 negative regulation of protein ubiquitination IEA
 biological_processGO:0032868 response to insulin IEA
 biological_processGO:0032922 circadian regulation of gene expression IEA
 biological_processGO:0033762 response to glucagon IEA
 biological_processGO:0042593 glucose homeostasis IEA
 biological_processGO:0042752 regulation of circadian rhythm IEA
 biological_processGO:0042754 negative regulation of circadian rhythm IEA
 biological_processGO:0043153 entrainment of circadian clock by photoperiod IEA
 biological_processGO:0045744 negative regulation of G-protein coupled receptor protein signaling pathway IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:2000001 regulation of DNA damage checkpoint IEA
 biological_processGO:2000323 negative regulation of glucocorticoid receptor signaling pathway IEA
 biological_processGO:2000850 negative regulation of glucocorticoid secretion IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0042622 photoreceptor outer segment membrane IDA
 cellular_componentGO:0097381 photoreceptor disc membrane IDA
 molecular_functionGO:0000989 transcription factor activity, transcription factor binding IEA
 molecular_functionGO:0001046 core promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001047 core promoter binding IEA
 molecular_functionGO:0003690 double-stranded DNA binding IEA
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0019900 kinase binding IEA
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0019902 phosphatase binding IEA
 molecular_functionGO:0035257 nuclear hormone receptor binding IEA
 molecular_functionGO:0042826 histone deacetylase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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