ENSDARG00000045768


Danio rerio

Features
Gene ID: ENSDARG00000045768
  
Biological name :cry1aa
  
Synonyms : cry1aa / cryptochrome circadian clock 1aa
  
Possible biological names infered from orthology : CRY1 / Cryptochrome-1 / cryptochrome circadian regulator 1 / P97784 / Q16526
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 12013043
Gene end: 12026507
  
Corresponding Affymetrix probe sets: Dr.10329.1.S1_at (Zebrafish Array)   NM_001077297_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000112452
Ensembl peptide - ENSDARP00000067280
NCBI entrez gene - 100003956     See in Manteia.
RefSeq - NM_001077297
RefSeq Peptide - NP_001070765
swissprot - A4QN37
ZFIN ID - ZDB-GENE-010426-2
Ensembl - ENSDARG00000045768
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CRY1ENSGALG00000012638Gallus gallus
 CRY1ENSG00000008405Homo sapiens
 Cry1ENSMUSG00000020038Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cry1ab / cryptochrome circadian clock 1ab / CRY1* / Q16526* / P97784* / Cryptochrome-1 * / cryptochrome circadian regulator 1*ENSDARG0000001158378
cry1ba / cryptochrome circadian clock 1baENSDARG0000006907473
cry1bb / cryptochrome circadian clock 1bbENSDARG0000009113165
cry2 / cryptochrome circadian clock 2 / Q9R194* / Q49AN0* / Cryptochrome-2 * / cryptochrome circadian regulator 2*ENSDARG0000010240363
cry5 / cryptochrome circadian clock 5ENSDARG0000001949847
cry4 / cryptochrome circadian clock 4ENSDARG0000001189045
si:ch1073-390k14.1ENSDARG0000008854923
cry-dash / cryptochrome DASHENSDARG0000000239623


Protein motifs (from Interpro)
Interpro ID Name
 IPR005101  Cryptochrome/DNA photolyase, FAD-binding domain
 IPR006050  DNA photolyase, N-terminal
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009416 response to light stimulus IDA
 biological_processGO:0009649 entrainment of circadian clock IDA
 biological_processGO:0042542 response to hydrogen peroxide IEP
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005667 transcription factor complex IPI
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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