ENSDARG00000102403


Danio rerio

Features
Gene ID: ENSDARG00000102403
  
Biological name :cry2
  
Synonyms : cry2 / cryptochrome circadian clock 2
  
Possible biological names infered from orthology : Cryptochrome-2 / cryptochrome circadian regulator 2 / Q49AN0 / Q9R194
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 13846883
Gene end: 13871121
  
Corresponding Affymetrix probe sets: Dr.10441.1.S1_at (Zebrafish Array)   Dr.6618.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000134736
Ensembl peptide - ENSDARP00000139726
NCBI entrez gene - 83774     See in Manteia.
swissprot - A0A0J9YJJ1
swissprot - Q7ZU53
ZFIN ID - ZDB-GENE-010426-6
Ensembl - ENSDARG00000102403
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CRY2ENSGALG00000008436Gallus gallus
 CRY2ENSG00000121671Homo sapiens
 Cry2ENSMUSG00000068742Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cry1ba / cryptochrome circadian clock 1baENSDARG0000006907465
cry1ab / cryptochrome circadian clock 1ab / CRY1* / Q16526* / P97784* / Cryptochrome-1 * / cryptochrome circadian regulator 1*ENSDARG0000001158365
cry1aa / cryptochrome circadian clock 1aa / CRY1* / Q16526* / P97784* / Cryptochrome-1 * / cryptochrome circadian regulator 1*ENSDARG0000004576865
cry1bb / cryptochrome circadian clock 1bbENSDARG0000009113162
cry5 / cryptochrome circadian clock 5ENSDARG0000001949848
cry4 / cryptochrome circadian clock 4ENSDARG0000001189046
si:ch1073-390k14.1ENSDARG0000008854923
cry-dash / cryptochrome DASHENSDARG0000000239623


Protein motifs (from Interpro)
Interpro ID Name
 IPR005101  Cryptochrome/DNA photolyase, FAD-binding domain
 IPR006050  DNA photolyase, N-terminal
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009266 response to temperature stimulus IDA
 biological_processGO:0009416 response to light stimulus IDA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005667 transcription factor complex IPI
 cellular_componentGO:0005737 cytoplasm IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr