ENSDARG00000019498


Danio rerio

Features
Gene ID: ENSDARG00000019498
  
Biological name :cry5
  
Synonyms : cry5 / cryptochrome circadian clock 5
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 39264802
Gene end: 39283883
  
Corresponding Affymetrix probe sets: Dr.10332.1.S1_at (Zebrafish Array)   Dr.10332.1.S2_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000015621
Ensembl peptide - ENSDARP00000144318
NCBI entrez gene - 83776     See in Manteia.
RefSeq - XM_005155405
swissprot - F1QHM9
ZFIN ID - ZDB-GENE-010426-8
Ensembl - ENSDARG00000019498
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cry1aa / cryptochrome circadian clock 1aa / CRY1* / Q16526* / P97784* / Cryptochrome-1 * / cryptochrome circadian regulator 1*ENSDARG0000004576856
cry2 / cryptochrome circadian clock 2 / Q9R194* / Q49AN0* / Cryptochrome-2 * / cryptochrome circadian regulator 2*ENSDARG0000010240356
cry1ba / cryptochrome circadian clock 1baENSDARG0000006907456
cry1ab / cryptochrome circadian clock 1ab / CRY1* / Q16526* / P97784* / Cryptochrome-1 * / cryptochrome circadian regulator 1*ENSDARG0000001158355
cry4 / cryptochrome circadian clock 4ENSDARG0000001189052
cry1bb / cryptochrome circadian clock 1bbENSDARG0000009113152
cry-dash / cryptochrome DASHENSDARG0000000239628
si:ch1073-390k14.1ENSDARG0000008854924


Protein motifs (from Interpro)
Interpro ID Name
 IPR005101  Cryptochrome/DNA photolyase, FAD-binding domain
 IPR006050  DNA photolyase, N-terminal
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IDA
 biological_processGO:0009416 response to light stimulus IDA
 molecular_functionGO:0003914 DNA (6-4) photolyase activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr