ENSDARG00000088549


Danio rerio

Features
Gene ID: ENSDARG00000088549
  
Biological name :si:ch1073-390k14.1
  
Synonyms : si:ch1073-390k14.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 6126506
Gene end: 6143192
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000105169
NCBI entrez gene - 101883856     See in Manteia.
RefSeq - XM_009293395
RefSeq - XM_021473221
swissprot - E7FFE4
ZFIN ID - ZDB-GENE-141215-14
Ensembl - ENSDARG00000088549
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cry2 / cryptochrome circadian clock 2 / Q9R194* / Q49AN0* / Cryptochrome-2 * / cryptochrome circadian regulator 2*ENSDARG0000010240317
cry1aa / cryptochrome circadian clock 1aa / CRY1* / Q16526* / P97784* / Cryptochrome-1 * / cryptochrome circadian regulator 1*ENSDARG0000004576817
cry1ab / cryptochrome circadian clock 1ab / CRY1* / Q16526* / P97784* / Cryptochrome-1 * / cryptochrome circadian regulator 1*ENSDARG0000001158317
cry1ba / cryptochrome circadian clock 1baENSDARG0000006907416
cry1bb / cryptochrome circadian clock 1bbENSDARG0000009113116
cry4 / cryptochrome circadian clock 4ENSDARG0000001189016
cry5 / cryptochrome circadian clock 5ENSDARG0000001949815
cry-dash / cryptochrome DASHENSDARG0000000239614


Protein motifs (from Interpro)
Interpro ID Name
 IPR002081  Cryptochrome/DNA photolyase class 1
 IPR005101  Cryptochrome/DNA photolyase, FAD-binding domain
 IPR006050  DNA photolyase, N-terminal
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold
 IPR018394  Cryptochrome/DNA photolyase class 1, conserved site, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr