ENSDARG00000091131


Danio rerio

Features
Gene ID: ENSDARG00000091131
  
Biological name :cry1bb
  
Synonyms : cry1bb / cryptochrome circadian clock 1bb
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 786556
Gene end: 809282
  
Corresponding Affymetrix probe sets: Dr.10330.1.S1_at (Zebrafish Array)   NM_131792_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000156438
Ensembl peptide - ENSDARP00000157589
Ensembl peptide - ENSDARP00000105808
Ensembl peptide - ENSDARP00000108036
Ensembl peptide - ENSDARP00000140813
Ensembl peptide - ENSDARP00000150344
NCBI entrez gene - 83780     See in Manteia.
RefSeq - NM_131792
RefSeq Peptide - NP_571867
swissprot - A0A0J9YJK7
swissprot - F1QU08
swissprot - F1QY08
ZFIN ID - ZDB-GENE-010426-5
Ensembl - ENSDARG00000091131
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cry1ba / cryptochrome circadian clock 1baENSDARG0000006907465
cry1ab / cryptochrome circadian clock 1ab / CRY1* / Q16526* / P97784* / Cryptochrome-1 * / cryptochrome circadian regulator 1*ENSDARG0000001158362
cry1aa / cryptochrome circadian clock 1aa / CRY1* / Q16526* / P97784* / Cryptochrome-1 * / cryptochrome circadian regulator 1*ENSDARG0000004576862
cry2 / cryptochrome circadian clock 2 / Q9R194* / Q49AN0* / Cryptochrome-2 * / cryptochrome circadian regulator 2*ENSDARG0000010240357
cry5 / cryptochrome circadian clock 5ENSDARG0000001949842
cry4 / cryptochrome circadian clock 4ENSDARG0000001189040
cry-dash / cryptochrome DASHENSDARG0000000239621
si:ch1073-390k14.1ENSDARG0000008854920


Protein motifs (from Interpro)
Interpro ID Name
 IPR005101  Cryptochrome/DNA photolyase, FAD-binding domain
 IPR006050  DNA photolyase, N-terminal
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr