ENSDARG00000002396


Danio rerio

Features
Gene ID: ENSDARG00000002396
  
Biological name :cry-dash
  
Synonyms : cry-dash / cryptochrome DASH
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 20194022
Gene end: 20208474
  
Corresponding Affymetrix probe sets: Dr.18310.1.S1_at (Zebrafish Array)   Dr.18310.2.A1_at (Zebrafish Array)   NM_205686_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000121988
NCBI entrez gene - 402986     See in Manteia.
RefSeq - NM_205686
RefSeq Peptide - NP_991249
swissprot - F1R5N7
ZFIN ID - ZDB-GENE-040617-2
Ensembl - ENSDARG00000002396
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cry1aa / cryptochrome circadian clock 1aa / CRY1* / Q16526* / P97784* / Cryptochrome-1 * / cryptochrome circadian regulator 1*ENSDARG0000004576827
cry5 / cryptochrome circadian clock 5ENSDARG0000001949827
cry1ba / cryptochrome circadian clock 1baENSDARG0000006907426
cry2 / cryptochrome circadian clock 2 / Q9R194* / Q49AN0* / Cryptochrome-2 * / cryptochrome circadian regulator 2*ENSDARG0000010240326
cry1bb / cryptochrome circadian clock 1bbENSDARG0000009113126
cry1ab / cryptochrome circadian clock 1ab / CRY1* / Q16526* / P97784* / Cryptochrome-1 * / cryptochrome circadian regulator 1*ENSDARG0000001158326
cry4 / cryptochrome circadian clock 4ENSDARG0000001189025
si:ch1073-390k14.1ENSDARG0000008854922


Protein motifs (from Interpro)
Interpro ID Name
 IPR002081  Cryptochrome/DNA photolyase class 1
 IPR005101  Cryptochrome/DNA photolyase, FAD-binding domain
 IPR006050  DNA photolyase, N-terminal
 IPR014133  Cryptochrome DASH
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 molecular_functionGO:0003913 DNA photolyase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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