ENSGALG00000012766


Gallus gallus

Features
Gene ID: ENSGALG00000012766
  
Biological name :SYCP3
  
Synonyms : SYCP3 / synaptonemal complex protein 3
  
Possible biological names infered from orthology : 1700013H16Rik / 1700040F15Rik / 3830403N18Rik / Gm1140 / Gm14692 / Gm20736 / Gm20792 / Gm20814 / Gm20817 / Gm20820 / Gm20824 / Gm20835 / Gm20838 / Gm20843 / Gm20850 / Gm20855 / Gm20869 / Gm20870 / Gm20883 / Gm20888 / Gm20890 / Gm20894 / Gm20896 / Gm20897 / Gm20903 / Gm20905 / Gm20906 / Gm20908 / Gm20911 / Gm20916 / Gm20920 / Gm20929 / Gm20931 / Gm20937 / Gm21094 / Gm21095 / Gm21117 / Gm21170 / Gm21173 / Gm21209 / Gm21256 / Gm21258 / Gm21294 / Gm21317 / Gm21366 / Gm21409 / Gm21477 / Gm21488 / Gm21497 / Gm21518 / Gm21627 / Gm21650 / Gm21679 / Gm21739 / Gm21760 / Gm21858 / Gm21861 / Gm21865 / Gm28490 / Gm28510 / Gm28553 / Gm28576 / Gm28827 / Gm28891 / Gm28897 / Gm28919 / Gm28998 / Gm29110 / Gm29554 / Gm29564 / Gm29582 / Gm29866 / Gm30737 / Gm31571 / Gm35134 / Gm773 / P05531 / predicted gene 773 / Q8IZU3 / RIKEN cDNA 1700013H16 gene / RIKEN cDNA 1700040F15 gene / RIKEN cDNA 3830403N18 gene / Sly / Sycp3 like Y-linked / X-linked lymphocyte-regulated / X-linked lymphocyte-regulated 5A / X-linked lymphocyte-regulated 5B / X-linked lymphocyte-regulated 5C / Xlr / Xlr5a / Xlr5b / Xlr5c
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 55616634
Gene end: 55625686
  
Corresponding Affymetrix probe sets: GgaAffx.8097.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020802
NCBI entrez gene - 418097     See in Manteia.
RefSeq - XM_004937837
RefSeq - XM_015287710
RefSeq - XM_416330
swissprot - E1BWM3
Ensembl - ENSGALG00000012766
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sycp3ENSDARG00000013438Danio rerio
 SYCP3ENSG00000139351Homo sapiens
 1700013H16RikENSMUSG00000054727Mus musculus
 1700040F15RikENSMUSG00000100667Mus musculus
 3830403N18RikENSMUSG00000031125Mus musculus
 Gm1140ENSMUSG00000079578Mus musculus
 Gm14692ENSMUSG00000079577Mus musculus
 Gm20736ENSMUSG00000093993Mus musculus
 Gm20792ENSMUSG00000101653Mus musculus
 Gm20814ENSMUSG00000101146Mus musculus
 Gm20817ENSMUSG00000100032Mus musculus
 Gm20820ENSMUSG00000100240Mus musculus
 Gm20824ENSMUSG00000101928Mus musculus
 Gm20835ENSMUSG00000101933Mus musculus
 Gm20838ENSMUSG00000095011Mus musculus
 Gm20843ENSMUSG00000096902Mus musculus
 Gm20850ENSMUSG00000100902Mus musculus
 Gm20855ENSMUSG00000095793Mus musculus
 Gm20869ENSMUSG00000099531Mus musculus
 Gm20870ENSMUSG00000100535Mus musculus
 Gm20883ENSMUSG00000102122Mus musculus
 Gm20888ENSMUSG00000094616Mus musculus
 Gm20890ENSMUSG00000100055Mus musculus
 Gm20894ENSMUSG00000101158Mus musculus
 Gm20896ENSMUSG00000096650Mus musculus
 Gm20897ENSMUSG00000100892Mus musculus
 Gm20903ENSMUSG00000099782Mus musculus
 Gm20905ENSMUSG00000101157Mus musculus
 Gm20906ENSMUSG00000099856Mus musculus
 Gm20908ENSMUSG00000101766Mus musculus
 Gm20911ENSMUSG00000099894Mus musculus
 Gm20916ENSMUSG00000094746Mus musculus
 Gm20920ENSMUSG00000100485Mus musculus
 Gm20929ENSMUSG00000100045Mus musculus
 Gm20931ENSMUSG00000094570Mus musculus
 Gm20937ENSMUSG00000096016Mus musculus
 Gm21094ENSMUSG00000095263Mus musculus
 Gm21095ENSMUSG00000095153Mus musculus
 Gm21117ENSMUSG00000096769Mus musculus
 Gm21170ENSMUSG00000094170Mus musculus
 Gm21173ENSMUSG00000100708Mus musculus
 Gm21209ENSMUSG00000095979Mus musculus
 Gm21256ENSMUSG00000094782Mus musculus
 Gm21258ENSMUSG00000095606Mus musculus
 Gm21294ENSMUSG00000102045Mus musculus
 Gm21317ENSMUSG00000101286Mus musculus
 Gm21366ENSMUSG00000103919Mus musculus
 Gm21409ENSMUSG00000099840Mus musculus
 Gm21477ENSMUSG00000094399Mus musculus
 Gm21488ENSMUSG00000099541Mus musculus
 Gm21497ENSMUSG00000100726Mus musculus
 Gm21518ENSMUSG00000094821Mus musculus
 Gm21627ENSMUSG00000100856Mus musculus
 Gm21650ENSMUSG00000094647Mus musculus
 Gm21679ENSMUSG00000094869Mus musculus
 Gm21739ENSMUSG00000094181Mus musculus
 Gm21760ENSMUSG00000095578Mus musculus
 Gm21858ENSMUSG00000095135Mus musculus
 Gm21861ENSMUSG00000096626Mus musculus
 Gm21865ENSMUSG00000093895Mus musculus
 Gm28490ENSMUSG00000094789Mus musculus
 Gm28510ENSMUSG00000101396Mus musculus
 Gm28553ENSMUSG00000100972Mus musculus
 Gm28576ENSMUSG00000100645Mus musculus
 Gm28827ENSMUSG00000099925Mus musculus
 Gm28891ENSMUSG00000095141Mus musculus
 Gm28897ENSMUSG00000099740Mus musculus
 Gm28919ENSMUSG00000101243Mus musculus
 Gm28998ENSMUSG00000100939Mus musculus
 Gm29110ENSMUSG00000101528Mus musculus
 Gm29554ENSMUSG00000100231Mus musculus
 Gm29564ENSMUSG00000099792Mus musculus
 Gm29582ENSMUSG00000100467Mus musculus
 Gm29866ENSMUSG00000102668Mus musculus
 Gm30737ENSMUSG00000104191Mus musculus
 Gm31571ENSMUSG00000103528Mus musculus
 Gm35134ENSMUSG00000103371Mus musculus
 Gm773ENSMUSG00000073177Mus musculus
 SlyENSMUSG00000101155Mus musculus
 Sycp3ENSMUSG00000020059Mus musculus
 XlrENSMUSG00000054626Mus musculus
 Xlr5aENSMUSG00000058328Mus musculus
 Xlr5bENSMUSG00000072479Mus musculus
 Xlr5cENSMUSG00000067764Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006888  XLR/SYCP3/FAM9 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035093 spermatogenesis, exchange of chromosomal proteins IEA
 biological_processGO:0051321 meiotic cell cycle IBA
 cellular_componentGO:0000795 synaptonemal complex IEA
 cellular_componentGO:0000800 lateral element IBA
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr