ENSGALG00000012941


Gallus gallus

Features
Gene ID: ENSGALG00000012941
  
Biological name :CDH12
  
Synonyms : cadherin 12 / CDH12
  
Possible biological names infered from orthology : P55289 / Q5RJH3
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 73245203
Gene end: 73614065
  
Corresponding Affymetrix probe sets: GgaAffx.8192.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021076
Ensembl peptide - ENSGALP00000055958
NCBI entrez gene - 420912     See in Manteia.
RefSeq - XM_015282213
swissprot - E1C235
Ensembl - ENSGALG00000012941
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdh12aENSDARG00000078226Danio rerio
 CDH12ENSG00000154162Homo sapiens
 Cdh12ENSMUSG00000040452Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CDH6 / Q90762 / Cadherin-6 / P55285* / P97326*ENSGALG0000001291762
CDH10 / cadherin-10 precursor / P70408* / Q9Y6N8* / cadherin 10*ENSGALG0000003202261
CDH9 / cadherin 9 / Q9ULB4*ENSGALG0000001292359
CDH18 / cadherin 18 / Q13634*ENSGALG0000003609758
CDH7 / cadherin-7 precursor / Q8BM92* / Q9ULB5* / cadherin 7*ENSGALG0000001378257
CDH11 / cadherin-11 precursor / P55287* / P55288* / cadherin 11*ENSGALG0000003998556
CDH8 / cadherin-8 / P55286* / P97291*ENSGALG0000000531956
CDH20 / Q8QGH3 / Cadherin-20 / Q9HBT6* / Q9Z0M3*ENSGALG0000001290655
CDH22 / cadherin 22 / Q9UJ99* / Q9WTP5*ENSGALG0000000721149
CDH19 / cadherin-19 precursor / Q9H159* / cadherin 19* / cadherin 19, type 2*ENSGALG0000001377547


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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