ENSGALG00000012923


Gallus gallus

Features
Gene ID: ENSGALG00000012923
  
Biological name :CDH9
  
Synonyms : cadherin 9 / CDH9
  
Possible biological names infered from orthology : Q9ULB4
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 71456440
Gene end: 71525194
  
Corresponding Affymetrix probe sets: GgaAffx.8176.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021049
NCBI entrez gene - 428487     See in Manteia.
RefSeq - XM_001231540
RefSeq - XM_015282209
RefSeq - XM_015282211
swissprot - E1C264
Ensembl - ENSGALG00000012923
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdh10aENSDARG00000055843Danio rerio
 cdh6ENSDARG00000014522Danio rerio
 LO017650.1ENSDARG00000103903Danio rerio
 CDH9ENSG00000113100Homo sapiens
 Cdh9ENSMUSG00000025370Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CDH6 / Q90762 / Cadherin-6 / P55285* / P97326*ENSGALG0000001291774
CDH10 / cadherin-10 precursor / P70408* / Q9Y6N8* / cadherin 10*ENSGALG0000003202272
CDH7 / cadherin-7 precursor / Q8BM92* / Q9ULB5* / cadherin 7*ENSGALG0000001378259
CDH12 / cadherin 12 / P55289* / Q5RJH3*ENSGALG0000001294159
CDH18 / cadherin 18 / Q13634*ENSGALG0000003609758
CDH8 / cadherin-8 / P55286* / P97291*ENSGALG0000000531957
CDH20 / Q8QGH3 / Cadherin-20 / Q9HBT6* / Q9Z0M3*ENSGALG0000001290657
CDH11 / cadherin-11 precursor / P55287* / P55288* / cadherin 11*ENSGALG0000003998557
CDH22 / cadherin 22 / Q9UJ99* / Q9WTP5*ENSGALG0000000721149
CDH19 / cadherin-19 precursor / Q9H159* / cadherin 19* / cadherin 19, type 2*ENSGALG0000001377548


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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