ENSGALG00000036097


Gallus gallus

Features
Gene ID: ENSGALG00000036097
  
Biological name :CDH18
  
Synonyms : cadherin 18 / CDH18
  
Possible biological names infered from orthology : Q13634
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 74510089
Gene end: 74695043
  
Corresponding Affymetrix probe sets: Gga.83.1.A1_at (Chicken Array)   Gga.83.1.S1_s_at (Chicken Array)   Gga.88.1.A1_at (Chicken Array)   Gga.88.1.S1_s_at (Chicken Array)   GgaAffx.24050.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053402
Ensembl peptide - ENSGALP00000058506
NCBI entrez gene - 428490     See in Manteia.
RefSeq - XM_015282214
RefSeq - XM_015282215
RefSeq - XM_015282216
RefSeq - XM_426046
swissprot - A0A1D5PZT9
swissprot - A0A1D5PKP1
Ensembl - ENSGALG00000036097
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDH18ENSDARG00000102769Danio rerio
 CDH18ENSG00000145526Homo sapiens
 Cdh18ENSMUSG00000040420Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CDH7 / cadherin-7 precursor / Q8BM92* / Q9ULB5* / cadherin 7*ENSGALG0000001378258
CDH10 / cadherin-10 precursor / P70408* / Q9Y6N8* / cadherin 10*ENSGALG0000003202256
CDH12 / cadherin 12 / P55289* / Q5RJH3*ENSGALG0000001294156
CDH11 / cadherin-11 precursor / P55287* / P55288* / cadherin 11*ENSGALG0000003998556
CDH9 / cadherin 9 / Q9ULB4*ENSGALG0000001292356
CDH6 / Q90762 / Cadherin-6 / P55285* / P97326*ENSGALG0000001291755
CDH20 / Q8QGH3 / Cadherin-20 / Q9HBT6* / Q9Z0M3*ENSGALG0000001290654
CDH8 / cadherin-8 / P55286* / P97291*ENSGALG0000000531953
CDH22 / cadherin 22 / Q9UJ99* / Q9WTP5*ENSGALG0000000721150
CDH19 / cadherin-19 precursor / Q9H159* / cadherin 19* / cadherin 19, type 2*ENSGALG0000001377547


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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