ENSG00000113100


Homo sapiens

Features
Gene ID: ENSG00000113100
  
Biological name :CDH9
  
Synonyms : cadherin 9 / CDH9 / Q9ULB4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: p14.1
Gene start: 26880600
Gene end: 27121150
  
Corresponding Affymetrix probe sets: 207729_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000231021
Ensembl peptide - ENSP00000426239
Ensembl peptide - ENSP00000422538
NCBI entrez gene - 1007     See in Manteia.
OMIM - 609974
RefSeq - NM_016279
RefSeq Peptide - NP_057363
swissprot - E7EPN0
swissprot - D6RBT9
swissprot - Q9ULB4
Ensembl - ENSG00000113100
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdh10aENSDARG00000055843Danio rerio
 cdh6ENSDARG00000014522Danio rerio
 LO017650.1ENSDARG00000103903Danio rerio
 CDH9ENSGALG00000012923Gallus gallus
 Cdh9ENSMUSG00000025370Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CDH6 / P55285 / cadherin 6ENSG0000011336172
CDH10 / Q9Y6N8 / cadherin 10ENSG0000004073169
CDH7 / Q9ULB5 / cadherin 7ENSG0000008113858
CDH18 / Q13634 / cadherin 18ENSG0000014552657
CDH12 / P55289 / cadherin 12ENSG0000015416257
CDH11 / P55287 / cadherin 11ENSG0000014093756
CDH20 / Q9HBT6 / cadherin 20ENSG0000010154255
CDH8 / P55286 / cadherin 8ENSG0000015039455
CDH22 / Q9UJ99 / cadherin 22ENSG0000014965451
CDH24 / Q86UP0 / cadherin 24ENSG0000013988048
CDH19 / Q9H159 / cadherin 19ENSG0000007199147


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007416 synapse assembly IEA
 biological_processGO:0034332 adherens junction organization TAS
 biological_processGO:0098609 cell-cell adhesion NAS
 biological_processGO:0099560 synaptic membrane adhesion IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0099055 integral component of postsynaptic membrane IEA
 cellular_componentGO:0099056 integral component of presynaptic membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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