ENSG00000149654


Homo sapiens

Features
Gene ID: ENSG00000149654
  
Biological name :CDH22
  
Synonyms : cadherin 22 / CDH22 / Q9UJ99
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: q13.12
Gene start: 46173733
Gene end: 46308498
  
Corresponding Affymetrix probe sets: 1569679_at (Human Genome U133 Plus 2.0 Array)   215181_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000361336
Ensembl peptide - ENSP00000437790
NCBI entrez gene - 64405     See in Manteia.
OMIM - 609920
RefSeq - XM_011528995
RefSeq - NM_021248
RefSeq - XM_011528994
RefSeq Peptide - NP_067071
swissprot - Q9UJ99
Ensembl - ENSG00000149654
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDH22ENSDARG00000098824Danio rerio
 CDH22ENSGALG00000007211Gallus gallus
 Cdh22ENSMUSG00000053166Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CDH20 / Q9HBT6 / cadherin 20ENSG0000010154251
CDH7 / Q9ULB5 / cadherin 7ENSG0000008113851
CDH18 / Q13634 / cadherin 18ENSG0000014552649
CDH11 / P55287 / cadherin 11ENSG0000014093748
CDH9 / Q9ULB4 / cadherin 9ENSG0000011310048
CDH6 / P55285 / cadherin 6ENSG0000011336148
CDH10 / Q9Y6N8 / cadherin 10ENSG0000004073148
CDH12 / P55289 / cadherin 12ENSG0000015416247
CDH8 / P55286 / cadherin 8ENSG0000015039447
CDH24 / Q86UP0 / cadherin 24ENSG0000013988044
CDH19 / Q9H159 / cadherin 19ENSG0000007199141


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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