ENSMUSG00000053166


Mus musculus

Features
Gene ID: ENSMUSG00000053166
  
Biological name :Cdh22
  
Synonyms : Cadherin-22 / Cdh22 / Q9WTP5
  
Possible biological names infered from orthology : Q9UJ99
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: H3
Gene start: 165111507
Gene end: 165234853
  
Corresponding Affymetrix probe sets: 10489629 (MoGene1.0st)   1424767_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000066864
Ensembl peptide - ENSMUSP00000120785
NCBI entrez gene - 104010     See in Manteia.
MGI - MGI:1341843
RefSeq - XM_017314854
RefSeq - NM_174988
RefSeq - XM_017314851
RefSeq - XM_017314852
RefSeq - XM_017314853
RefSeq - XM_006498534
RefSeq Peptide - NP_778153
swissprot - Q9WTP5
swissprot - I6L9J1
Ensembl - ENSMUSG00000053166
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDH22ENSDARG00000098824Danio rerio
 CDH22ENSGALG00000007211Gallus gallus
 CDH22ENSG00000149654Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cdh20 / Q9Z0M3 / Cadherin-20 / Q9HBT6*ENSMUSG0000005084052
Cdh7 / Q8BM92 / Cadherin-7 / Q9ULB5*ENSMUSG0000002631252
Cdh18 / cadherin 18 / Q13634*ENSMUSG0000004042051
Cdh10 / P70408 / Cadherin-10 / Q9Y6N8*ENSMUSG0000002232149
Cdh9 / cadherin 9 / Q9ULB4*ENSMUSG0000002537049
Cdh8 / P97291 / Cadherin-8 / P55286*ENSMUSG0000003651048
Cdh11 / P55288 / Cadherin-11 / P55287*ENSMUSG0000003167348
Cdh12 / Q5RJH3 / Cadherin-12 / P55289*ENSMUSG0000004045248
Cdh6 / P97326 / Cadherin-6 / P55285*ENSMUSG0000003938548
Cdh24 / Q6PFX6 / Cadherin-24 / Q86UP0*ENSMUSG0000005967444
Cdh19 / cadherin 19, type 2 / Q9H159* / cadherin 19*ENSMUSG0000004721639


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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