ENSMUSG00000047216


Mus musculus

Features
Gene ID: ENSMUSG00000047216
  
Biological name :Cdh19
  
Synonyms : cadherin 19, type 2 / Cdh19
  
Possible biological names infered from orthology : cadherin 19 / Q9H159
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: E2.1
Gene start: 110888326
Gene end: 110977584
  
Corresponding Affymetrix probe sets: 10357103 (MoGene1.0st)   1457373_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000092210
NCBI entrez gene - 227485     See in Manteia.
MGI - MGI:3588198
RefSeq - XM_017320389
RefSeq - NM_001081386
RefSeq - XM_006529520
RefSeq - XM_006529521
RefSeq - XM_011247991
RefSeq Peptide - NP_001074855
RefSeq Peptide - NP_001343344
swissprot - E9Q3A7
Ensembl - ENSMUSG00000047216
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01109081.1ENSDARG00000100598Danio rerio
 CDH19ENSGALG00000013775Gallus gallus
 CDH19ENSG00000071991Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cdh7 / Q8BM92 / Cadherin-7 / Q9ULB5*ENSMUSG0000002631248
Cdh6 / P97326 / Cadherin-6 / P55285*ENSMUSG0000003938545
Cdh9 / cadherin 9 / Q9ULB4*ENSMUSG0000002537045
Cdh10 / P70408 / Cadherin-10 / Q9Y6N8*ENSMUSG0000002232145
Cdh20 / Q9Z0M3 / Cadherin-20 / Q9HBT6*ENSMUSG0000005084045
Cdh12 / Q5RJH3 / Cadherin-12 / P55289*ENSMUSG0000004045245
Cdh18 / cadherin 18 / Q13634*ENSMUSG0000004042044
Cdh8 / P97291 / Cadherin-8 / P55286*ENSMUSG0000003651042
Cdh11 / P55288 / Cadherin-11 / P55287*ENSMUSG0000003167342
Cdh22 / Q9WTP5 / Cadherin-22 / Q9UJ99*ENSMUSG0000005316641
Cdh24 / Q6PFX6 / Cadherin-24 / Q86UP0*ENSMUSG0000005967439


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0005477 increased circulating thyroxine level "greater than the normal blood concentration of the major hormone dervied from the thryoid gland; it normally affects cellular metabolism" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Catsper3tm1.1(KOMP)Vlcg/Catsper3tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Catsper3tm1.1(KOMP)Vlcg/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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