ENSMUSG00000031673


Mus musculus

Features
Gene ID: ENSMUSG00000031673
  
Biological name :Cdh11
  
Synonyms : Cadherin-11 / Cdh11 / P55288
  
Possible biological names infered from orthology : P55287
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: D1
Gene start: 102632095
Gene end: 102785642
  
Corresponding Affymetrix probe sets: 10581013 (MoGene1.0st)   1435120_at (Mouse Genome 430 2.0 Array)   1450757_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000074681
NCBI entrez gene - 12552     See in Manteia.
MGI - MGI:99217
RefSeq - XM_006530626
RefSeq - NM_009866
RefSeq - XM_006530623
RefSeq - XM_006530624
RefSeq Peptide - NP_033996
swissprot - P55288
Ensembl - ENSMUSG00000031673
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdh11ENSDARG00000021442Danio rerio
 CDH11ENSGALG00000039985Gallus gallus
 CDH11ENSG00000140937Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cdh8 / P97291 / Cadherin-8 / P55286*ENSMUSG0000003651065
Cdh18 / cadherin 18 / Q13634*ENSMUSG0000004042058
Cdh10 / P70408 / Cadherin-10 / Q9Y6N8*ENSMUSG0000002232157
Cdh6 / P97326 / Cadherin-6 / P55285*ENSMUSG0000003938556
Cdh20 / Q9Z0M3 / Cadherin-20 / Q9HBT6*ENSMUSG0000005084056
Cdh7 / Q8BM92 / Cadherin-7 / Q9ULB5*ENSMUSG0000002631256
Cdh9 / cadherin 9 / Q9ULB4*ENSMUSG0000002537055
Cdh24 / Q6PFX6 / Cadherin-24 / Q86UP0*ENSMUSG0000005967455
Cdh12 / Q5RJH3 / Cadherin-12 / P55289*ENSMUSG0000004045254
Cdh22 / Q9WTP5 / Cadherin-22 / Q9UJ99*ENSMUSG0000005316649
Cdh19 / cadherin 19, type 2 / Q9H159* / cadherin 19*ENSMUSG0000004721641


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0021957 corticospinal tract morphogenesis IGI
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001212 skin lesions "focal patches of inflammation on the skin" [J:30162]
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Allelic Composition: Bhlhe22tm1Meg/Bhlhe22tm1Meg
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0001689 incomplete somite formation "arrest of differentiation or patterning of the somites" [J:62882]
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Allelic Composition: Cdc7tm1Hmas/Cdc7tm1Hmas,Trp53tm2Mok/Trp53tm2Mok
Genetic Background: involves: 129S/Sv * C57BL/6

 MP:0009682 abnormal anterior corticospinal tract morphology "any structural anomaly of the small bundle of corticospinal motor fibers that do not cross the midline at the pyramidal decussation and descend into the anterior funiculus of the spinal cord; the anterior corticospinal tract controls central axial and girdle muscles" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Bhlhe22tm1Meg/Bhlhe22tm1Meg,Cdh11tm1Mta/Cdh11tm1Mta
Genetic Background: involves: 129S1/Sv * 129S6/SvEvTac * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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