ENSG00000154162


Homo sapiens

Features
Gene ID: ENSG00000154162
  
Biological name :CDH12
  
Synonyms : cadherin 12 / CDH12 / P55289
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: p14.3
Gene start: 21750673
Gene end: 22853622
  
Corresponding Affymetrix probe sets: 207149_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000371689
Ensembl peptide - ENSP00000423577
Ensembl peptide - ENSP00000428786
NCBI entrez gene - 1010     See in Manteia.
OMIM - 600562
RefSeq - XM_017008921
RefSeq - NM_001317227
RefSeq - NM_001317228
RefSeq - NM_004061
RefSeq - XM_011513927
RefSeq - XM_017008920
RefSeq Peptide - NP_001304156
RefSeq Peptide - NP_001304157
RefSeq Peptide - NP_004052
swissprot - P55289
Ensembl - ENSG00000154162
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdh12aENSDARG00000078226Danio rerio
 CDH12ENSGALG00000012941Gallus gallus
 Cdh12ENSMUSG00000040452Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CDH6 / P55285 / cadherin 6ENSG0000011336161
CDH10 / Q9Y6N8 / cadherin 10ENSG0000004073160
CDH7 / Q9ULB5 / cadherin 7ENSG0000008113857
CDH18 / Q13634 / cadherin 18ENSG0000014552657
CDH9 / Q9ULB4 / cadherin 9ENSG0000011310057
CDH11 / P55287 / cadherin 11ENSG0000014093756
CDH20 / Q9HBT6 / cadherin 20ENSG0000010154256
CDH8 / P55286 / cadherin 8ENSG0000015039455
CDH22 / Q9UJ99 / cadherin 22ENSG0000014965449
CDH24 / Q86UP0 / cadherin 24ENSG0000013988047
CDH19 / Q9H159 / cadherin 19ENSG0000007199146


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0034332 adherens junction organization TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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