ENSG00000113361


Homo sapiens

Features
Gene ID: ENSG00000113361
  
Biological name :CDH6
  
Synonyms : cadherin 6 / CDH6 / P55285
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: p13.3
Gene start: 31193750
Gene end: 31329146
  
Corresponding Affymetrix probe sets: 205532_s_at (Human Genome U133 Plus 2.0 Array)   205533_s_at (Human Genome U133 Plus 2.0 Array)   210601_at (Human Genome U133 Plus 2.0 Array)   210602_s_at (Human Genome U133 Plus 2.0 Array)   214803_at (Human Genome U133 Plus 2.0 Array)   232631_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000424843
Ensembl peptide - ENSP00000265071
NCBI entrez gene - 1004     See in Manteia.
OMIM - 603007
RefSeq - XM_017008911
RefSeq - NM_004932
RefSeq - XM_011513921
RefSeq - XM_017008910
RefSeq Peptide - NP_004923
swissprot - D6RF86
swissprot - P55285
Ensembl - ENSG00000113361
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdh10aENSDARG00000055843Danio rerio
 cdh6ENSDARG00000014522Danio rerio
 LO017650.1ENSDARG00000103903Danio rerio
 CDH6ENSGALG00000012917Gallus gallus
 Cdh6ENSMUSG00000039385Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CDH10 / Q9Y6N8 / cadherin 10ENSG0000004073173
CDH9 / Q9ULB4 / cadherin 9ENSG0000011310072
CDH12 / P55289 / cadherin 12ENSG0000015416261
CDH7 / Q9ULB5 / cadherin 7ENSG0000008113859
CDH11 / P55287 / cadherin 11ENSG0000014093758
CDH20 / Q9HBT6 / cadherin 20ENSG0000010154258
CDH8 / P55286 / cadherin 8ENSG0000015039457
CDH18 / Q13634 / cadherin 18ENSG0000014552656
CDH22 / Q9UJ99 / cadherin 22ENSG0000014965450
CDH24 / Q86UP0 / cadherin 24ENSG0000013988048
CDH19 / Q9H159 / cadherin 19ENSG0000007199146


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007219 Notch signaling pathway IEA
 biological_processGO:0034332 adherens junction organization TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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