ENSGALG00000013383


Gallus gallus

Features
Gene ID: ENSGALG00000013383
  
Biological name :PPIE
  
Synonyms : peptidylprolyl isomerase E / PPIE
  
Possible biological names infered from orthology : Peptidyl-prolyl cis-trans isomerase E / Q9QZH3 / Q9UNP9
  
Species: Gallus gallus
  
Chr. number: 23
Strand: -1
Band:
Gene start: 5477642
Gene end: 5481538
  
Corresponding Affymetrix probe sets: Gga.4709.1.S1_at (Chicken Array)   Gga.4709.2.S1_a_at (Chicken Array)   GgaAffx.8521.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021793
Ensembl peptide - ENSGALP00000063197
Ensembl peptide - ENSGALP00000053445
Ensembl peptide - ENSGALP00000050792
NCBI entrez gene - 426061     See in Manteia.
RefSeq - XM_004947868
swissprot - E1BUM0
swissprot - A0A1L1RWI0
swissprot - A0A1D5PKT2
swissprot - A0A1D5PDE7
Ensembl - ENSGALG00000013383
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ppieENSDARG00000103234Danio rerio
 PPIEENSG00000084072Homo sapiens
 PpieENSMUSG00000028651Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PPIF / peptidylprolyl isomerase F / P30405* / Q99KR7* / Peptidyl-prolyl cis-trans isomerase F, mitochondrial *ENSGALG0000000480937
PPIA / Q9Y536* / F5H284* / Gm5160* / P0DN26* / P17742* / P0DN37* / P62937* / PPIAL4D* / PPIAL4A* / Gm12728* / PPIAL4G* / PPIAL4F* / PPIAL4E* / PPIAL4C* / A0A075B759* / A0A0B4J2A2* / AC24375...ENSGALG0000002860034
RGPD6* / RGPD5* / RGPD4* / RGPD3* / RGPD2* / RGPD8* / RGPD1* / RANBP2* / A6NKT7* / O14715* / P0DJD0* / P0DJD1* / P49792* / Q7Z3J3* / Q99666* / Q9ERU9* / RAN binding protein 2* / E3 SUMO-pro...ENSGALG0000001680833
ENSGALG000000445999
ENSGALG000000336198
ENSGALG000000459478


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR002130  Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR016304  Peptidyl-prolyl cis-trans isomerase E
 IPR020892  Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
 IPR024936  Cyclophilin-type peptidyl-prolyl cis-trans isomerase
 IPR029000  Cyclophilin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0000413 protein peptidyl-prolyl isomerization IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006457 protein folding IEA
 biological_processGO:0045070 positive regulation of viral genome replication IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0071007 U2-type catalytic step 2 spliceosome IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA
 molecular_functionGO:0008143 poly(A) binding IEA
 molecular_functionGO:0016853 isomerase activity IEA


Pathways (from Reactome)
Pathway description
Formation of TC-NER Pre-Incision Complex
Dual incision in TC-NER
Gap-filling DNA repair synthesis and ligation in TC-NER
Neutrophil degranulation
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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