ENSDARG00000103234


Danio rerio

Features
Gene ID: ENSDARG00000103234
  
Biological name :ppie
  
Synonyms : peptidylprolyl isomerase E (cyclophilin E) / ppie
  
Possible biological names infered from orthology : Peptidyl-prolyl cis-trans isomerase E / peptidylprolyl isomerase E / Q9QZH3 / Q9UNP9
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 25296982
Gene end: 25303486
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000130313
swissprot - A0A0R4IBK2
ZFIN ID - ZDB-GENE-050417-167
Ensembl - ENSDARG00000103234
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPIEENSGALG00000013383Gallus gallus
 PPIEENSG00000084072Homo sapiens
 PpieENSMUSG00000028651Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RANBP2 / si:ch1073-55a19.2 / RGPD4* / RGPD8* / RGPD2* / RGPD1* / RGPD3* / RGPD6* / RGPD5* / A6NKT7* / O14715* / P0DJD0* / P0DJD1* / P49792* / Q7Z3J3* / Q99666* / Q9ERU9* / RAN binding prote...ENSDARG0000009312535
ppifb / peptidylprolyl isomerase Fb / PPIF* / P30405* / Q99KR7* / peptidylprolyl isomerase F* / Peptidyl-prolyl cis-trans isomerase F, mitochondrial *ENSDARG0000005284234
ppiab / peptidylprolyl isomerase Ab (cyclophilin A)ENSDARG0000010399434
ppifa / peptidylprolyl isomerase FaENSDARG0000000740934
ppiaa / peptidylprolyl isomerase Aa (cyclophilin A)ENSDARG0000000921232


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR002130  Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
 IPR016304  Peptidyl-prolyl cis-trans isomerase E
 IPR020892  Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
 IPR024936  Cyclophilin-type peptidyl-prolyl cis-trans isomerase
 IPR029000  Cyclophilin-like domain superfamily
 IPR034168  Peptidyl-prolyl cis-trans isomerase E, RNA recognition motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000413 protein peptidyl-prolyl isomerization IEA
 biological_processGO:0006457 protein folding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA
 molecular_functionGO:0016853 isomerase activity IEA


Pathways (from Reactome)
Pathway description
Formation of TC-NER Pre-Incision Complex
Dual incision in TC-NER
Gap-filling DNA repair synthesis and ligation in TC-NER
Neutrophil degranulation
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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