ENSGALG00000013602


Gallus gallus

Features
Gene ID: ENSGALG00000013602
  
Biological name :PCM1
  
Synonyms : PCM1 / Pericentriolar material 1 protein / Q8AV28
  
Possible biological names infered from orthology : pericentriolar material 1 / Q15154 / Q9R0L6
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 63220812
Gene end: 63258683
  
Corresponding Affymetrix probe sets: Gga.10933.1.S1_at (Chicken Array)   Gga.3449.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022090
NCBI entrez gene - 395204     See in Manteia.
RefSeq - XM_015285412
RefSeq - NM_204531
RefSeq - XM_015285410
RefSeq - XM_015285411
RefSeq - XM_015285401
RefSeq - XM_015285403
RefSeq - XM_015285404
RefSeq - XM_015285405
RefSeq - XM_015285406
RefSeq - XM_015285407
RefSeq - XM_015285408
RefSeq - XM_015285409
RefSeq Peptide - NP_989862
swissprot - Q8AV28
Ensembl - ENSGALG00000013602
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcm1ENSDARG00000062198Danio rerio
 PCM1ENSG00000078674Homo sapiens
 Pcm1ENSMUSG00000031592Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR024138  Pericentriolar material 1 protein
 IPR031446  Pericentriolar material 1 protein, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001764 neuron migration IEA
 biological_processGO:0007098 centrosome cycle IEA
 biological_processGO:0022027 interkinetic nuclear migration IEA
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0031122 cytoplasmic microtubule organization IEA
 biological_processGO:0034453 microtubule anchoring IEA
 biological_processGO:0034454 microtubule anchoring at centrosome IBA
 biological_processGO:0035176 social behavior IEA
 biological_processGO:0035735 intraciliary transport involved in cilium assembly IEA
 biological_processGO:0050768 negative regulation of neurogenesis IEA
 biological_processGO:0060271 cilium assembly ISS
 biological_processGO:0071539 protein localization to centrosome IEA
 biological_processGO:0090316 positive regulation of intracellular protein transport IEA
 biological_processGO:0097150 neuronal stem cell population maintenance IEA
 biological_processGO:1905515 non-motile cilium assembly IEA
 cellular_componentGO:0000242 pericentriolar material IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IBA
 cellular_componentGO:0005814 centriole IEA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0034451 centriolar satellite IEA
 cellular_componentGO:0035869 ciliary transition zone IEA
 cellular_componentGO:0036064 ciliary basal body IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0045177 apical part of cell IEA


Pathways (from Reactome)
Pathway description
Regulation of PLK1 Activity at G2/M Transition
Loss of Nlp from mitotic centrosomes
Recruitment of mitotic centrosome proteins and complexes
Loss of proteins required for interphase microtubule organization from the centrosome
Recruitment of NuMA to mitotic centrosomes
Anchoring of the basal body to the plasma membrane
AURKA Activation by TPX2


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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