ENSGALG00000013635


Gallus gallus

Features
Gene ID: ENSGALG00000013635
  
Biological name :SCAF8
  
Synonyms : SCAF8 / SR-related CTD associated factor 8
  
Possible biological names infered from orthology : Protein SCAF8 / Q6DID3 / Q9UPN6
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 50474825
Gene end: 50506241
  
Corresponding Affymetrix probe sets: Gga.18414.1.S1_s_at (Chicken Array)   Gga.18970.1.S1_s_at (Chicken Array)   GgaAffx.24236.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022143
NCBI entrez gene - 421647     See in Manteia.
RefSeq - XM_015284243
RefSeq - XM_015284244
RefSeq - XM_015284245
RefSeq - XM_015284246
RefSeq - XM_015284247
RefSeq - XM_015284248
RefSeq - XM_015284242
swissprot - F1NW30
Ensembl - ENSGALG00000013635
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCAF8ENSG00000213079Homo sapiens
 Scaf8ENSMUSG00000046201Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SCAF4 / splicing factor, arginine/serine-rich 15 / O95104* / SR-related CTD associated factor 4*ENSGALG0000003396533


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR006569  CID domain
 IPR006903  RNA polymerase II-binding domain
 IPR008942  ENTH/VHS
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr