ENSGALG00000014202


Gallus gallus

Features
Gene ID: ENSGALG00000014202
  
Biological name :GABRA4
  
Synonyms : GABRA4 / gamma-aminobutyric acid type A receptor alpha4 subunit
  
Possible biological names infered from orthology : Gamma-aminobutyric acid receptor subunit alpha-4 / P48169 / Q9D6F4
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 67356760
Gene end: 67392287
  
Corresponding Affymetrix probe sets: GgaAffx.9006.1.S1_at (Chicken Array)   GgaAffx.9006.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022926
NCBI entrez gene - 422770     See in Manteia.
RefSeq - XM_004936058
RefSeq - XM_420724
swissprot - E1C890
Ensembl - ENSGALG00000014202
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gabra4ENSDARG00000013389Danio rerio
 GABRA4ENSG00000109158Homo sapiens
 Gabra4ENSMUSG00000029211Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q90845 / GABRA6 / Gamma-aminobutyric acid receptor subunit alpha-6 / P16305* / Q16445* / gamma-aminobutyric acid type A receptor alpha6 subunit*ENSGALG0000000169558
P19150 / GABRA1 / Gamma-aminobutyric acid receptor subunit alpha-1 / P62812* / P14867* / gamma-aminobutyric acid type A receptor alpha1 subunit* / Mus musculus gamma-aminobutyric acid (GAB...ENSGALG0000000169848
GABRA5 / gamma-aminobutyric acid type A receptor alpha5 subunit / P31644* / Q8BHJ7* / Gamma-aminobutyric acid receptor subunit alpha-5 *ENSGALG0000001674448
GABRA3 / gamma-aminobutyric acid type A receptor alpha3 subunit / P26049* / P34903* / Mus musculus gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3 (Gabra3), transcript variant 3, mRNA.*ENSGALG0000000726947
GABRA2 / gamma-aminobutyric acid type A receptor alpha2 subunit / P26048* / P47869* / Gamma-aminobutyric acid receptor subunit alpha-2 *ENSGALG0000001420647
GABRG2 / P21548 / Gamma-aminobutyric acid receptor subunit gamma-2 / P22723* / P18507* / gamma-aminobutyric acid type A receptor gamma2 subunit*ENSGALG0000003804237
GABRG1 / gamma-aminobutyric acid type A receptor gamma1 subunit / Q8N1C3* / Q9R0Y8* / Gamma-aminobutyric acid receptor subunit gamma-1 *ENSGALG0000002014336
GABRE / P34904 / Gamma-aminobutyric acid receptor subunit gamma-4 ENSGALG0000002029234
GABRG3* / P27681* / Q99928* / Gamma-aminobutyric acid receptor subunit gamma-3 * / gamma-aminobutyric acid type A receptor gamma3 subunit*ENSGALG0000004104219
GABRG3* / P27681* / Q99928* / Gamma-aminobutyric acid receptor subunit gamma-3 * / gamma-aminobutyric acid type A receptor gamma3 subunit*ENSGALG0000003929316
ENSGALG000000142006


Protein motifs (from Interpro)
Interpro ID Name
 IPR001390  Gamma-aminobutyric-acid A receptor, alpha subunit
 IPR005434  Gamma-aminobutyric-acid A receptor, alpha 4 subunit
 IPR006028  Gamma-aminobutyric acid A receptor/Glycine receptor alpha
 IPR006029  Neurotransmitter-gated ion-channel transmembrane domain
 IPR006201  Neurotransmitter-gated ion-channel
 IPR006202  Neurotransmitter-gated ion-channel ligand-binding domain
 IPR018000  Neurotransmitter-gated ion-channel, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0007214 gamma-aminobutyric acid signaling pathway IEA
 biological_processGO:0007417 central nervous system development IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:2001023 regulation of response to drug IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:1902711 GABA-A receptor complex IBA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0004890 GABA-A receptor activity IBA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005230 extracellular ligand-gated ion channel activity IEA


Pathways (from Reactome)
Pathway description
GABA A receptor activation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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