ENSGALG00000038042


Gallus gallus

Features
Gene ID: ENSGALG00000038042
  
Biological name :GABRG2
  
Synonyms : GABRG2 / Gamma-aminobutyric acid receptor subunit gamma-2 / P21548
  
Possible biological names infered from orthology : gamma-aminobutyric acid type A receptor gamma2 subunit / P18507 / P22723
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 7058890
Gene end: 7128456
  
Corresponding Affymetrix probe sets: Gga.1895.1.S1_at (Chicken Array)   Gga.1895.1.S2_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053851
NCBI entrez gene - 396289     See in Manteia.
RefSeq - NM_205345
RefSeq - XM_015293638
RefSeq Peptide - NP_990676
swissprot - P21548
Ensembl - ENSGALG00000038042
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gabrg2ENSDARG00000053665Danio rerio
 GABRG2ENSG00000113327Homo sapiens
 Gabrg2ENSMUSG00000020436Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GABRG1 / gamma-aminobutyric acid type A receptor gamma1 subunit / Q8N1C3* / Q9R0Y8* / Gamma-aminobutyric acid receptor subunit gamma-1 *ENSGALG0000002014372
GABRE / P34904 / Gamma-aminobutyric acid receptor subunit gamma-4 ENSGALG0000002029263
GABRA4 / gamma-aminobutyric acid type A receptor alpha4 subunit / P48169* / Q9D6F4* / Gamma-aminobutyric acid receptor subunit alpha-4 *ENSGALG0000001420243
Q90845 / GABRA6 / Gamma-aminobutyric acid receptor subunit alpha-6 / P16305* / Q16445* / gamma-aminobutyric acid type A receptor alpha6 subunit*ENSGALG0000000169543
P19150 / GABRA1 / Gamma-aminobutyric acid receptor subunit alpha-1 / P62812* / P14867* / gamma-aminobutyric acid type A receptor alpha1 subunit* / Mus musculus gamma-aminobutyric acid (GAB...ENSGALG0000000169841
GABRA2 / gamma-aminobutyric acid type A receptor alpha2 subunit / P26048* / P47869* / Gamma-aminobutyric acid receptor subunit alpha-2 *ENSGALG0000001420640
GABRA3 / gamma-aminobutyric acid type A receptor alpha3 subunit / P26049* / P34903* / Mus musculus gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3 (Gabra3), transcript variant 3, mRNA.*ENSGALG0000000726940
GABRA5 / gamma-aminobutyric acid type A receptor alpha5 subunit / P31644* / Q8BHJ7* / Gamma-aminobutyric acid receptor subunit alpha-5 *ENSGALG0000001674440
GABRG3* / P27681* / Q99928* / Gamma-aminobutyric acid receptor subunit gamma-3 * / gamma-aminobutyric acid type A receptor gamma3 subunit*ENSGALG0000004104234
GABRG3* / P27681* / Q99928* / Gamma-aminobutyric acid receptor subunit gamma-3 * / gamma-aminobutyric acid type A receptor gamma3 subunit*ENSGALG0000003929331
ENSGALG000000142007


Protein motifs (from Interpro)
Interpro ID Name
 IPR005437  Gamma-aminobutyric-acid A receptor, gamma subunit
 IPR005439  Gamma-aminobutyric-acid A receptor, gamma 2 subunit
 IPR006028  Gamma-aminobutyric acid A receptor/Glycine receptor alpha
 IPR006029  Neurotransmitter-gated ion-channel transmembrane domain
 IPR006201  Neurotransmitter-gated ion-channel
 IPR006202  Neurotransmitter-gated ion-channel ligand-binding domain
 IPR018000  Neurotransmitter-gated ion-channel, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0007214 gamma-aminobutyric acid signaling pathway IEA
 biological_processGO:0007268 chemical synaptic transmission IEA
 biological_processGO:0009791 post-embryonic development IEA
 biological_processGO:0030534 adult behavior IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0071420 cellular response to histamine IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0034707 chloride channel complex IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 cellular_componentGO:1902711 GABA-A receptor complex IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0004890 GABA-A receptor activity ISS
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005230 extracellular ligand-gated ion channel activity IEA
 molecular_functionGO:0005254 chloride channel activity ISS


Pathways (from Reactome)
Pathway description
GABA A receptor activation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000029392 GABRB3 / P19019 / Gamma-aminobutyric acid receptor subunit beta-3 / P63080* / P28472* / gamma-aminobutyric acid type A receptor beta3 subunit*  / complex
 ENSGALG00000001690 GABRB2 / gamma-aminobutyric acid type A receptor beta2 subunit / P47870* / P63137* / Gamma-aminobutyric acid receptor subunit beta-2 *  / complex
 ENSGALG00000033183 GABRQ / P24045 / Gamma-aminobutyric acid receptor subunit beta-4 / Q9UN88* / Q9JLF1* / Gamma-aminobutyric acid receptor subunit theta * / gamma-aminobutyric acid type A receptor theta subunit*  / complex






 

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