ENSGALG00000001698


Gallus gallus

Features
Gene ID: ENSGALG00000001698
  
Biological name :GABRA1
  
Synonyms : GABRA1 / Gamma-aminobutyric acid receptor subunit alpha-1 / P19150
  
Possible biological names infered from orthology : gamma-aminobutyric acid type A receptor alpha1 subunit / Mus musculus gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 (Gabra1), transcript variant 2, mRNA. / P14867 / P62812
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 7191328
Gene end: 7233372
  
Corresponding Affymetrix probe sets: Gga.17167.1.S1_at (Chicken Array)   Gga.19174.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000002606
NCBI entrez gene - 374214     See in Manteia.
RefSeq - NM_204318
RefSeq - XM_015293637
RefSeq Peptide - NP_989649
swissprot - P19150
Ensembl - ENSGALG00000001698
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gabra1ENSDARG00000068989Danio rerio
 GABRA1ENSG00000022355Homo sapiens
 Gabra1ENSMUSG00000010803Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GABRA2 / gamma-aminobutyric acid type A receptor alpha2 subunit / P26048* / P47869* / Gamma-aminobutyric acid receptor subunit alpha-2 *ENSGALG0000001420677
GABRA3 / gamma-aminobutyric acid type A receptor alpha3 subunit / P26049* / P34903* / Mus musculus gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3 (Gabra3), transcript variant 3, mRNA.*ENSGALG0000000726972
GABRA5 / gamma-aminobutyric acid type A receptor alpha5 subunit / P31644* / Q8BHJ7* / Gamma-aminobutyric acid receptor subunit alpha-5 *ENSGALG0000001674470
GABRA4 / gamma-aminobutyric acid type A receptor alpha4 subunit / P48169* / Q9D6F4* / Gamma-aminobutyric acid receptor subunit alpha-4 *ENSGALG0000001420258
Q90845 / GABRA6 / Gamma-aminobutyric acid receptor subunit alpha-6 / P16305* / Q16445* / gamma-aminobutyric acid type A receptor alpha6 subunit*ENSGALG0000000169556
GABRG1 / gamma-aminobutyric acid type A receptor gamma1 subunit / Q8N1C3* / Q9R0Y8* / Gamma-aminobutyric acid receptor subunit gamma-1 *ENSGALG0000002014344
GABRG2 / P21548 / Gamma-aminobutyric acid receptor subunit gamma-2 / P22723* / P18507* / gamma-aminobutyric acid type A receptor gamma2 subunit*ENSGALG0000003804243
GABRE / P34904 / Gamma-aminobutyric acid receptor subunit gamma-4 ENSGALG0000002029240
GABRG3* / P27681* / Q99928* / Gamma-aminobutyric acid receptor subunit gamma-3 * / gamma-aminobutyric acid type A receptor gamma3 subunit*ENSGALG0000004104222
GABRG3* / P27681* / Q99928* / Gamma-aminobutyric acid receptor subunit gamma-3 * / gamma-aminobutyric acid type A receptor gamma3 subunit*ENSGALG0000003929318
ENSGALG000000142008


Protein motifs (from Interpro)
Interpro ID Name
 IPR001390  Gamma-aminobutyric-acid A receptor, alpha subunit
 IPR005431  Gamma-aminobutyric-acid A receptor, alpha 1 subunit
 IPR006028  Gamma-aminobutyric acid A receptor/Glycine receptor alpha
 IPR006029  Neurotransmitter-gated ion-channel transmembrane domain
 IPR006201  Neurotransmitter-gated ion-channel
 IPR006202  Neurotransmitter-gated ion-channel ligand-binding domain
 IPR018000  Neurotransmitter-gated ion-channel, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0007214 gamma-aminobutyric acid signaling pathway IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0060078 regulation of postsynaptic membrane potential IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0034707 chloride channel complex IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 cellular_componentGO:1902711 GABA-A receptor complex IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0004890 GABA-A receptor activity IBA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005230 extracellular ligand-gated ion channel activity IEA
 molecular_functionGO:0005254 chloride channel activity IEA
 molecular_functionGO:0022851 GABA-gated chloride ion channel activity IEA
 molecular_functionGO:1904315 transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential IEA


Pathways (from Reactome)
Pathway description
GABA A receptor activation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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