ENSGALG00000020143


Gallus gallus

Features
Gene ID: ENSGALG00000020143
  
Biological name :GABRG1
  
Synonyms : GABRG1 / gamma-aminobutyric acid type A receptor gamma1 subunit
  
Possible biological names infered from orthology : Gamma-aminobutyric acid receptor subunit gamma-1 / Q8N1C3 / Q9R0Y8
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 67576491
Gene end: 67624911
  
Corresponding Affymetrix probe sets: Gga.5062.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022934
NCBI entrez gene - 422771     See in Manteia.
RefSeq - XM_015285484
RefSeq - XM_420725
swissprot - Q7LZ70
Ensembl - ENSGALG00000020143
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gabrg1ENSDARG00000101995Danio rerio
 GABRG1ENSG00000163285Homo sapiens
 Gabrg1ENSMUSG00000001260Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GABRG2 / P21548 / Gamma-aminobutyric acid receptor subunit gamma-2 / P22723* / P18507* / gamma-aminobutyric acid type A receptor gamma2 subunit*ENSGALG0000003804273
GABRE / P34904 / Gamma-aminobutyric acid receptor subunit gamma-4 ENSGALG0000002029264
Q90845 / GABRA6 / Gamma-aminobutyric acid receptor subunit alpha-6 / P16305* / Q16445* / gamma-aminobutyric acid type A receptor alpha6 subunit*ENSGALG0000000169543
P19150 / GABRA1 / Gamma-aminobutyric acid receptor subunit alpha-1 / P62812* / P14867* / gamma-aminobutyric acid type A receptor alpha1 subunit* / Mus musculus gamma-aminobutyric acid (GAB...ENSGALG0000000169843
GABRA4 / gamma-aminobutyric acid type A receptor alpha4 subunit / P48169* / Q9D6F4* / Gamma-aminobutyric acid receptor subunit alpha-4 *ENSGALG0000001420243
GABRA5 / gamma-aminobutyric acid type A receptor alpha5 subunit / P31644* / Q8BHJ7* / Gamma-aminobutyric acid receptor subunit alpha-5 *ENSGALG0000001674442
GABRA2 / gamma-aminobutyric acid type A receptor alpha2 subunit / P26048* / P47869* / Gamma-aminobutyric acid receptor subunit alpha-2 *ENSGALG0000001420641
GABRA3 / gamma-aminobutyric acid type A receptor alpha3 subunit / P26049* / P34903* / Mus musculus gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3 (Gabra3), transcript variant 3, mRNA.*ENSGALG0000000726941
GABRG3* / P27681* / Q99928* / Gamma-aminobutyric acid receptor subunit gamma-3 * / gamma-aminobutyric acid type A receptor gamma3 subunit*ENSGALG0000004104234
GABRG3* / P27681* / Q99928* / Gamma-aminobutyric acid receptor subunit gamma-3 * / gamma-aminobutyric acid type A receptor gamma3 subunit*ENSGALG0000003929332
ENSGALG000000142007


Protein motifs (from Interpro)
Interpro ID Name
 IPR005437  Gamma-aminobutyric-acid A receptor, gamma subunit
 IPR006028  Gamma-aminobutyric acid A receptor/Glycine receptor alpha
 IPR006029  Neurotransmitter-gated ion-channel transmembrane domain
 IPR006201  Neurotransmitter-gated ion-channel
 IPR006202  Neurotransmitter-gated ion-channel ligand-binding domain
 IPR018000  Neurotransmitter-gated ion-channel, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0007214 gamma-aminobutyric acid signaling pathway IEA
 biological_processGO:0007268 chemical synaptic transmission IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0004890 GABA-A receptor activity IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005230 extracellular ligand-gated ion channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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