ENSDARG00000101995


Danio rerio

Features
Gene ID: ENSDARG00000101995
  
Biological name :gabrg1
  
Synonyms : gabrg1 / gamma-aminobutyric acid type A receptor gamma1 subunit
  
Possible biological names infered from orthology : Gamma-aminobutyric acid receptor subunit gamma-1 / Q8N1C3 / Q9R0Y8
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 12174937
Gene end: 12202658
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000135823
Ensembl peptide - ENSDARP00000141668
swissprot - A0A0R4IPF9
swissprot - A0A0R4IZ75
ZFIN ID - ZDB-GENE-141215-66
Ensembl - ENSDARG00000101995
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GABRG1ENSGALG00000020143Gallus gallus
 GABRG1ENSG00000163285Homo sapiens
 Gabrg1ENSMUSG00000001260Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gabrg2 / gamma-aminobutyric acid (GABA) A receptor, gamma 2 / P18507* / P22723* / Gamma-aminobutyric acid receptor subunit gamma-2 * / gamma-aminobutyric acid type A receptor gamma2 subunit*ENSDARG0000005366572
gabra1 / gamma-aminobutyric acid (GABA) A receptor, alpha 1 / P14867* / P62812* / gamma-aminobutyric acid type A receptor alpha1 subunit* / Mus musculus gamma-aminobutyric acid (GABA) A rec...ENSDARG0000006898942
gabra4 / gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4 / P48169* / gamma-aminobutyric acid type A receptor alpha4 subunit*ENSDARG0000001338942
gabra2a / gamma-aminobutyric acid type A receptor alpha2 subunit a / P47869* / GABRA2* / P26048* / Gamma-aminobutyric acid receptor subunit alpha-2 * / gamma-aminobutyric acid type A recept...ENSDARG0000009145941
gabra6b / gamma-aminobutyric acid (GABA) A receptor, alpha 6b / GABRA6* / Q16445* / gamma-aminobutyric acid type A receptor alpha6 subunit*ENSDARG0000005873641
gabra5 / gamma-aminobutyric acid (GABA) A receptor, alpha 5 / P31644* / Q8BHJ7* / Gamma-aminobutyric acid receptor subunit alpha-5 * / gamma-aminobutyric acid type A receptor alpha5 subunit*ENSDARG0000007073040
gabra6a / gamma-aminobutyric acid (GABA) A receptor, alpha 6a / Q16445* / GABRA6* / P16305* / Gamma-aminobutyric acid receptor subunit alpha-6 * / gamma-aminobutyric acid type A receptor al...ENSDARG0000007505838
gabra3 / gamma-aminobutyric acid (GABA) A receptor, alpha 3 / P34903* / gamma-aminobutyric acid type A receptor alpha3 subunit*ENSDARG0000009088330
GABRA2 / gamma-aminobutyric acid type A receptor alpha2 subunit / P47869*ENSDARG0000011373720


Protein motifs (from Interpro)
Interpro ID Name
 IPR005437  Gamma-aminobutyric-acid A receptor, gamma subunit
 IPR006028  Gamma-aminobutyric acid A receptor/Glycine receptor alpha
 IPR006029  Neurotransmitter-gated ion-channel transmembrane domain
 IPR006201  Neurotransmitter-gated ion-channel
 IPR006202  Neurotransmitter-gated ion-channel ligand-binding domain
 IPR018000  Neurotransmitter-gated ion-channel, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0007214 gamma-aminobutyric acid signaling pathway IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0004890 GABA-A receptor activity IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005230 extracellular ligand-gated ion channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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