ENSGALG00000014554


Gallus gallus

Features
Gene ID: ENSGALG00000014554
  
Biological name :ATN1
  
Synonyms : ATN1 / atrophin 1
  
Possible biological names infered from orthology : Gm45234 / O35126 / P54259 / predicted gene 45234
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 77317847
Gene end: 77325309
  
Corresponding Affymetrix probe sets: Gga.10441.1.S1_s_at (Chicken Array)   Gga.9020.1.S1_at (Chicken Array)   GgaAffx.24452.1.S1_s_at (Chicken Array)   GgaAffx.24452.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054213
Ensembl peptide - ENSGALP00000057915
NCBI entrez gene - 427946     See in Manteia.
RefSeq - XM_004938120
RefSeq - XM_015293875
RefSeq - XM_015293881
swissprot - A0A1D5PY66
swissprot - A0A1D5PMX6
Ensembl - ENSGALG00000014554
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atn1ENSDARG00000092067Danio rerio
 ATN1ENSG00000111676Homo sapiens
 Atn1ENSMUSG00000004263Mus musculus
 O35126ENSMUSG00000107478Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RERE / arginine-glutamic acid dipeptide repeats / Q80TZ9* / Q9P2R6* / Arginine-glutamic acid dipeptide repeats protein *ENSGALG0000000223240
MTA1 / metastasis-associated protein MTA1 / Q13330* / Q8K4B0* / metastasis associated 1* / Mus musculus metastasis associated 1 (Mta1), transcript variant 2, mRNA.*ENSGALG000000028036
MTA3 / metastasis associated 1 family member 3 / Q924K8* / Q9BTC8* / Metastasis-associated protein MTA3 *ENSGALG000000099255


Protein motifs (from Interpro)
Interpro ID Name
 IPR002951  Atrophin-like
 IPR017993  Atrophin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0051402 neuron apoptotic process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016363 nuclear matrix IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0019904 protein domain specific binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr