ENSDARG00000092067


Danio rerio

Features
Gene ID: ENSDARG00000092067
  
Biological name :atn1
  
Synonyms : atn1 / atrophin 1
  
Possible biological names infered from orthology : Gm45234 / O35126 / P54259 / predicted gene 45234
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 31853919
Gene end: 31868985
  
Corresponding Affymetrix probe sets: Dr.23663.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000116176
NCBI entrez gene - 321707     See in Manteia.
RefSeq - XM_017351523
RefSeq - XM_021466941
RefSeq - XM_005158189
RefSeq - XM_021473002
RefSeq - XM_021473003
RefSeq - XM_021473001
swissprot - F6PDP0
ZFIN ID - ZDB-GENE-030131-426
Ensembl - ENSDARG00000092067
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATN1ENSGALG00000014554Gallus gallus
 ATN1ENSG00000111676Homo sapiens
 Atn1ENSMUSG00000004263Mus musculus
 O35126ENSMUSG00000107478Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rerea / arginine-glutamic acid dipeptide (RE) repeats a / RERE* / Q80TZ9* / Q9P2R6* / arginine-glutamic acid dipeptide repeats* / Arginine-glutamic acid dipeptide repeats protein *ENSDARG0000007735320
rereb / arginine-glutamic acid dipeptide (RE) repeats b / RERE* / Q80TZ9* / Q9P2R6* / arginine-glutamic acid dipeptide repeats* / Arginine-glutamic acid dipeptide repeats protein *ENSDARG0000007567019
mta1 / metastasis associated 1 / Q13330* / Q8K4B0* / Mus musculus metastasis associated 1 (Mta1), transcript variant 2, mRNA.*ENSDARG000000071983
mta2 / metastasis associated 1 family, member 2 / O94776* / Q9R190* / Metastasis-associated protein MTA2 *ENSDARG000000130313
mta3 / metastasis associated 1 family, member 3 / Q924K8* / Q9BTC8* / Metastasis-associated protein MTA3 *ENSDARG000000549032


Protein motifs (from Interpro)
Interpro ID Name
 IPR002951  Atrophin-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr