ENSGALG00000014568


Gallus gallus

Features
Gene ID: ENSGALG00000014568
  
Biological name :EMG1
  
Synonyms : EMG1
  
Possible biological names infered from orthology : EMG1, N1-specific pseudouridine methyltransferase / O35130 / Q92979 / Ribosomal RNA small subunit methyltransferase NEP1
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 77354660
Gene end: 77356911
  
Corresponding Affymetrix probe sets: Gga.2089.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000062693
Ensembl peptide - ENSGALP00000023447
NCBI entrez gene - 418292     See in Manteia.
RefSeq - NM_001278069
RefSeq Peptide - NP_001264998
swissprot - F1N832
swissprot - A0A1L1RV39
Ensembl - ENSGALG00000014568
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 emg1ENSDARG00000056914Danio rerio
 EMG1ENSG00000126749Homo sapiens
 EMG1ENSG00000268439Homo sapiens
 Emg1ENSMUSG00000004268Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005304  Ribosomal biogenesis, methyltransferase, EMG1/NEP1
 IPR029028  Alpha/beta knot methyltransferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0001824 blastocyst development IEA
 biological_processGO:0017126 nucleologenesis IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0070475 rRNA base methylation IBA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0032040 small-subunit processome IBA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0019843 rRNA binding IBA
 molecular_functionGO:0070037 rRNA (pseudouridine) methyltransferase activity IBA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr