ENSGALG00000015118


Gallus gallus

Features
Gene ID: ENSGALG00000015118
  
Biological name :SMC5
  
Synonyms : SMC5 / structural maintenance of chromosomes 5
  
Possible biological names infered from orthology : Q8CG46 / Q8IY18 / Structural maintenance of chromosomes protein 5
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 34954146
Gene end: 35009188
  
Corresponding Affymetrix probe sets: Gga.2365.2.S1_at (Chicken Array)   GgaAffx.12402.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000059417
Ensembl peptide - ENSGALP00000024348
NCBI entrez gene - 431608     See in Manteia.
RefSeq - XM_015280318
RefSeq - NM_001039335
RefSeq Peptide - NP_001034424
swissprot - A0A1L1RKZ8
swissprot - F1NK20
Ensembl - ENSGALG00000015118
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 smc5ENSDARG00000044282Danio rerio
 SMC5ENSG00000198887Homo sapiens
 Smc5ENSMUSG00000024943Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003395  RecF/RecN/SMC, N-terminal
 IPR027131  Structural maintenance of chromosomes protein 5
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000722 telomere maintenance via recombination IEA
 biological_processGO:0000724 double-strand break repair via homologous recombination IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007062 sister chromatid cohesion IEA
 biological_processGO:0034184 positive regulation of maintenance of mitotic sister chromatid cohesion IEA
 biological_processGO:0051984 positive regulation of chromosome segregation IEA
 biological_processGO:0090398 cellular senescence IEA
 cellular_componentGO:0000781 chromosome, telomeric region IEA
 cellular_componentGO:0000803 sex chromosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016605 PML body IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030915 Smc5-Smc6 complex IEA
 cellular_componentGO:0035061 interchromatin granule IEA
 cellular_componentGO:0035861 site of double-strand break IEA


Pathways (from Reactome)
Pathway description
SUMOylation of DNA damage response and repair proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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