ENSGALG00000015416


Gallus gallus

Features
Gene ID: ENSGALG00000015416
  
Biological name :SDR16C5
  
Synonyms : epidermal retinol dehydrogenase 2 / SDR16C5
  
Possible biological names infered from orthology : Q05A13 / Q7TQA3 / Q8N3Y7 / Sdr16c6 / short chain dehydrogenase/reductase family 16C member 5 / Short-chain dehydrogenase/reductase family 16C member 6
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 111662304
Gene end: 111676008
  
Corresponding Affymetrix probe sets: Gga.3904.1.S1_at (Chicken Array)   Gga.4788.1.S1_at (Chicken Array)   GgaAffx.12005.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000024821
NCBI entrez gene - 421130     See in Manteia.
RefSeq - NM_001031022
RefSeq Peptide - NP_001026193
swissprot - F1NUP9
Ensembl - ENSGALG00000015416
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sdr16c5aENSDARG00000016233Danio rerio
 si:dkey-221h15.4ENSDARG00000041873Danio rerio
 Q8N3Y7ENSG00000170786Homo sapiens
 Q05A13ENSMUSG00000071019Mus musculus
 Q7TQA3ENSMUSG00000028236Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG0000002282750
RDH10 / retinol dehydrogenase 10 / Q8IZV5* / Q8VCH7*ENSGALG0000003434648
Q9EQ06* / Q7Z5P4* / Q8NBQ5* / Q8VCR2* / HSD17B11* / HSD17B13* / hydroxysteroid 17-beta dehydrogenase 11* / hydroxysteroid 17-beta dehydrogenase 13*ENSGALG0000001097943
DHRS3 / dehydrogenase/reductase 3 / O75911* / O88876* / Short-chain dehydrogenase/reductase 3 *ENSGALG0000003037637


Protein motifs (from Interpro)
Interpro ID Name
 IPR002347  Short-chain dehydrogenase/reductase SDR
 IPR016040  NAD(P)-binding domain
 IPR020904  Short-chain dehydrogenase/reductase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
RA biosynthesis pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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