ENSMUSG00000071019


Mus musculus

Features
Gene ID: ENSMUSG00000071019
  
Biological name :Sdr16c6
  
Synonyms : Q05A13 / Sdr16c6 / Short-chain dehydrogenase/reductase family 16C member 6
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: A1
Gene start: 4055929
Gene end: 4077522
  
Corresponding Affymetrix probe sets: 10511353 (MoGene1.0st)   1457025_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000092773
Ensembl peptide - ENSMUSP00000104020
NCBI entrez gene - 242286     See in Manteia.
MGI - MGI:2685269
RefSeq - XM_017320193
RefSeq - NM_001080710
RefSeq Peptide - NP_001074179
swissprot - Q05A13
Ensembl - ENSMUSG00000071019
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sdr16c5aENSDARG00000016233Danio rerio
 si:dkey-221h15.4ENSDARG00000041873Danio rerio
 SDR16C5ENSGALG00000015416Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q7TQA3 / Sdr16c5 / Epidermal retinol dehydrogenase 2 / Q8N3Y7* / short chain dehydrogenase/reductase family 16C member 5*ENSMUSG0000002823659
Rdh10 / Q8VCH7 / Retinol dehydrogenase 10 / Q8IZV5*ENSMUSG0000002592142
Q9EQ06 / Hsd17b11 / hydroxysteroid (17-beta) dehydrogenase 11 / Q8NBQ5*ENSMUSG0000002931140
Q8VCR2 / Hsd17b13 / hydroxysteroid (17-beta) dehydrogenase 13 / Q7Z5P4*ENSMUSG0000003452838
Dhrs3 / O88876 / Short-chain dehydrogenase/reductase 3 / O75911* / dehydrogenase/reductase 3*ENSMUSG0000006602636


Protein motifs (from Interpro)
Interpro ID Name
 IPR002347  Short-chain dehydrogenase/reductase SDR
 IPR036291  NAD(P)-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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