ENSGALG00000015554


Gallus gallus

Features
Gene ID: ENSGALG00000015554
  
Biological name :SORCS2
  
Synonyms : SORCS2 / sortilin related VPS10 domain containing receptor 2
  
Possible biological names infered from orthology : Q96PQ0 / Q9EPR5
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 80580328
Gene end: 81104973
  
Corresponding Affymetrix probe sets: GgaAffx.9906.1.S1_at (Chicken Array)   GgaAffx.9912.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000025032
Ensembl peptide - ENSGALP00000049193
Ensembl peptide - ENSGALP00000047492
Ensembl peptide - ENSGALP00000046536
NCBI entrez gene - 428797     See in Manteia.
RefSeq - XM_015285866
swissprot - A0A1D5P8Z4
swissprot - A0A1D5P484
swissprot - A0A1D5P1J8
swissprot - F1N8X3
Ensembl - ENSGALG00000015554
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sorcs2ENSDARG00000077465Danio rerio
 Q96PQ0ENSG00000184985Homo sapiens
 Q9EPR5ENSMUSG00000029093Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SORCS1 / sortilin related VPS10 domain containing receptor 1 / Q8WY21*ENSGALG0000000846543
SORCS3 / sortilin related VPS10 domain containing receptor 3 / Q8VI51* / Q9UPU3* / VPS10 domain-containing receptor SorCS3 *ENSGALG0000000843442
SORL1 / sortilin-related receptor / O88307* / Q92673* / sortilin related receptor 1*ENSGALG0000000659823
SORT1 / sortilin 1 / Q6PHU5* / Q99523* / Sortilin *ENSGALG0000003357217


Protein motifs (from Interpro)
Interpro ID Name
 IPR000601  PKD domain
 IPR006581  VPS10
 IPR031777  Sortilin, C-terminal
 IPR031778  Sortilin, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr