ENSGALG00000015571


Gallus gallus

Features
Gene ID: ENSGALG00000015571
  
Biological name :RAD17
  
Synonyms : cell cycle checkpoint protein RAD17 / RAD17
  
Possible biological names infered from orthology : O75943 / Q6NXW6 / RAD17 checkpoint clamp loader component
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 64164704
Gene end: 64181084
  
Corresponding Affymetrix probe sets: Gga.17469.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000036846
NCBI entrez gene - 404778     See in Manteia.
RefSeq - NM_213584
RefSeq - XM_015280600
RefSeq Peptide - NP_998749
swissprot - F1NTX9
Ensembl - ENSGALG00000015571
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rad17ENSDARG00000018918Danio rerio
 RAD17ENSG00000152942Homo sapiens
 Rad17ENSMUSG00000021635Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004582  Checkpoint protein Rad17/Rad24
 IPR018324  Checkpoint protein Rad17/Rad24, fungi/metazoa
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000077 DNA damage checkpoint IBA
 biological_processGO:0006281 DNA repair IBA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007093 mitotic cell cycle checkpoint IEA
 biological_processGO:0008156 negative regulation of DNA replication IEA
 biological_processGO:0033314 mitotic DNA replication checkpoint IBA
 biological_processGO:0042325 regulation of phosphorylation IEA
 cellular_componentGO:0000781 chromosome, telomeric region IEA
 cellular_componentGO:0000790 nuclear chromatin IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0031389 Rad17 RFC-like complex IEA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0003689 DNA clamp loader activity IBA


Pathways (from Reactome)
Pathway description
Activation of ATR in response to replication stress
HDR through Single Strand Annealing (SSA)
Processing of DNA double-strand break ends
Presynaptic phase of homologous DNA pairing and strand exchange


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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