ENSGALG00000016217


Gallus gallus

Features
Gene ID: ENSGALG00000016217
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : KDM6A / lysine demethylase 6A / Lysine-specific demethylase 6A / O14607 / O15550 / O70546 / ubiquitously transcribed tetratricopeptide repeat containing, Y-linked / ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome / UTY
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 110833548
Gene end: 110980821
  
Corresponding Affymetrix probe sets: Gga.14148.1.S1_at (Chicken Array)   Gga.4808.1.S1_s_at (Chicken Array)   GgaAffx.24893.1.S1_s_at (Chicken Array)   GgaAffx.24893.6.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055394
Ensembl peptide - ENSGALP00000026095
Ensembl peptide - ENSGALP00000054516
NCBI entrez gene - 418556     See in Manteia.
RefSeq - XM_015300714
RefSeq - XM_015300692
RefSeq - XM_015300702
RefSeq - XM_015300708
RefSeq - XM_015300617
RefSeq - XM_015300624
RefSeq - XM_015300628
RefSeq - XM_015300636
RefSeq - XM_015300640
RefSeq - XM_015300648
RefSeq - XM_015300653
RefSeq - XM_015300656
RefSeq - XM_015300662
RefSeq - XM_015300670
RefSeq - XM_015300678
RefSeq - XM_015300685
swissprot - F1NKC1
swissprot - V9GWR3
swissprot - A0A1D5PNS2
Ensembl - ENSGALG00000016217
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 kdm6aENSDARG00000061759Danio rerio
 KDM6AENSG00000147050Homo sapiens
 UTYENSG00000183878Homo sapiens
 Kdm6aENSMUSG00000037369Mus musculus
 UtyENSMUSG00000068457Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003347  JmjC domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0071557 histone H3-K27 demethylation IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0071558 histone demethylase activity (H3-K27 specific) IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr