ENSGALG00000016389


Gallus gallus

Features
Gene ID: ENSGALG00000016389
  
Biological name :RNASEH1
  
Synonyms : ribonuclease H1 precursor / RNASEH1
  
Possible biological names infered from orthology : AC108488.2 / O60930 / ribonuclease H1 / ribonuclease H1 isoform 2
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 94082713
Gene end: 94088785
  
Corresponding Affymetrix probe sets: Gga.500.1.S1_at (Chicken Array)   Gga.6917.1.A1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051598
Ensembl peptide - ENSGALP00000026388
NCBI entrez gene - 395848     See in Manteia.
RefSeq - NM_204998
RefSeq Peptide - NP_990329
swissprot - F1NN23
swissprot - A0A1D5PFN1
Ensembl - ENSGALG00000016389
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnaseh1ENSDARG00000042571Danio rerio
 AC108488.2ENSG00000255767Homo sapiens
 O60930ENSG00000171865Homo sapiens
 Rnaseh1ENSMUSG00000020630Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002156  Ribonuclease H domain
 IPR009027  Ribosomal protein L9/RNase H1, N-terminal
 IPR011320  Ribonuclease H1, N-terminal
 IPR012337  Ribonuclease H-like superfamily
 IPR017067  Ribonuclease H1, eukaryote


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043137 DNA replication, removal of RNA primer IBA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0004523 RNA-DNA hybrid ribonuclease activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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