ENSGALG00000017026


Gallus gallus

Features
Gene ID: ENSGALG00000017026
  
Biological name :VPS36
  
Synonyms : vacuolar protein sorting 36 homolog / VPS36
  
Possible biological names infered from orthology : Q86VN1 / Q91XD6 / vacuolar protein sorting 36
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 170416091
Gene end: 170435074
  
Corresponding Affymetrix probe sets: GgaAffx.10904.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027458
NCBI entrez gene - 418883     See in Manteia.
RefSeq - XM_417077
swissprot - F1P5B8
Ensembl - ENSGALG00000017026
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vps36ENSDARG00000057021Danio rerio
 VPS36ENSG00000136100Homo sapiens
 Vps36ENSMUSG00000031479Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011991  ArsR-like helix-turn-helix domain
 IPR011993  PH-like domain superfamily
 IPR021648  Vacuolar protein sorting protein 36, GLUE domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032509 endosome transport via multivesicular body sorting pathway IEA
 biological_processGO:0043328 protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IBA
 cellular_componentGO:0000814 ESCRT II complex IBA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005770 late endosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0032266 phosphatidylinositol-3-phosphate binding IEA
 molecular_functionGO:0043130 ubiquitin binding IBA


Pathways (from Reactome)
Pathway description
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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